Basic Information
Locus ID:
Chr12G037350
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 55955280 | 55960387 | + | Chr12G037350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 785 | 1053 | 3.23864E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 782 | 979 | 3.8E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 332 | 371 | 1.7E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 76 | 5.8E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 757 | 1050 | 1.21E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 477 | 681 | 2.19E-33 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 127 | 405 | 7.14E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 294 | 416 | 9.4E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 741 | 854 | 4.4E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 436 | 700 | 1.9E-44 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 156 | 6.5E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 855 | 1056 | 1.6E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 157 | 293 | 1.8E-41 | IPR032675 |
| SMART | SM00220 | serkin_6 | 779 | 1057 | 1.1E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 134 | 157 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 204 | 228 | 4.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 569 | 592 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 358 | 382 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 252 | 276 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 593 | 617 | 9.4 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 779 | 1053 | 38.70385 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 785 | 807 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 899 | 911 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 183 | 196 | 1.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 593 | 606 | 1.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_039782526.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Panicum virgatum] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811MGE7 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS4381 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology