Basic Information
Locus ID:
Chr12G033870
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 53157454 | 53161634 | - | Chr12G033870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 57 | 314 | 1.55268E-136 | - |
| Pfam | PF00069 | Protein kinase domain | 57 | 315 | 8.4E-73 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 362 | 421 | 9.9E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 433 | 496 | 2.0E-13 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 56 | 323 | 1.11E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 339 | 508 | 1.29E-44 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 143 | 323 | 2.0E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 60 | 142 | 1.2E-26 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 324 | 498 | 1.4E-51 | - |
| SMART | SM00054 | efh_1 | 398 | 426 | 1.5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 57 | 315 | 1.7E-96 | IPR000719 |
| SMART | SM00054 | efh_1 | 362 | 390 | 6.9E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 470 | 498 | 3.3E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 434 | 462 | 7.0E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 466 | 501 | 13.564962 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 315 | 48.004025 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 358 | 393 | 15.461849 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 430 | 465 | 13.341799 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 394 | 429 | 8.822743 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 479 | 491 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 177 | 189 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 371 | 383 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 443 | 455 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 407 | 419 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 63 | 90 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.1 | calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro | 0 |
| RefSeq | XP_025794993.1 | calcium-dependent protein kinase 8 [Panicum hallii] | 0 |
| Q75GE8 | Calcium-dependent protein kinase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6SAL7 | Calcium-dependent protein kinase 8-like OS=Panicum miliaceum OX=4540 GN=C2845_PM02G44040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology