halophFGD

Basic Information

Locus ID: Chr12G032770

Species & Taxonomic ID: Sporobolus alterniflorus & 29706

Genome Assembly: GWHCBIM00000000

Short Name: SPX4

Description: SPX domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
GWHCBIM00000012	52282808	52285453	-	Chr12G032770

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
0.00	0.00 Da	0.00	0.00	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03105	SPX domain	79	116	6.5E-7	IPR004331
ProSiteProfiles	PS51382	SPX domain profile.	1	125	16.386703	IPR004331
MobiDBLite	mobidb-lite	consensus disorder prediction	163	187	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	233	278	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	246	262	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT5G15330.1	SPX domain gene 4.
RefSeq	XP_034572297.1	SPX domain-containing protein 4 [Setaria viridis]
Swiss-Prot	A2XNL6	SPX domain-containing protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=SPX4 PE=3 SV=1
TrEMBL	A0A5J9W8M1	SPX domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_03759 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	7	jg1807, jg19778, jg26804, jg26810, jg31624, jg40243, jg4615
Aizoaceae	Mesembryanthemum crystallinum	3	gene_10628, gene_17870, gene_24638
Amaranthaceae	Atriplex hortensis	4	Ah014346, Ah023211, Ah032813, Ah034692
Amaranthaceae	Beta vulgaris	4	BVRB_2g030200, BVRB_2g040290, BVRB_2g040330, BVRB_8g194430
Amaranthaceae	Salicornia bigelovii	9	Sbi_jg21595, Sbi_jg21596, Sbi_jg22225, Sbi_jg29246 ... Sbi_jg29726, Sbi_jg3485, Sbi_jg40704, Sbi_jg43246, Sbi_jg50711
Amaranthaceae	Salicornia europaea	4	Seu_jg16149, Seu_jg18652, Seu_jg2265, Seu_jg6478
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00000237, GOSA_00004399, GOSA_00007962, GOSA_00008753
Amaranthaceae	Suaeda glauca	9	Sgl11336, Sgl16725, Sgl42039, Sgl46815, Sgl62697, Sgl66461 ... Sgl67258, Sgl67318, Sgl70785
Amaranthaceae	Chenopodium album	11	gene:ENSEOMG00000012025, gene:ENSEOMG00000013004 ... gene:ENSEOMG00000014340, gene:ENSEOMG00000017603, gene:ENSEOMG00000018317, gene:ENSEOMG00000018792, gene:ENSEOMG00000033603, gene:ENSEOMG00000033674, gene:ENSEOMG00000048000, gene:ENSEOMG00000048014, gene:ENSEOMG00000049114
Amaranthaceae	Chenopodium quinoa	8	CQ.Regalona.r1.1AG0006580, CQ.Regalona.r1.1BG0021300 ... CQ.Regalona.r1.2AG0006570, CQ.Regalona.r1.2AG0022880, CQ.Regalona.r1.2BG0006790, CQ.Regalona.r1.2BG0022880, CQ.Regalona.r1.8AG0021950, CQ.Regalona.r1.8BG0020520
Anacardiaceae	Pistacia vera	4	pistato.v30002460, pistato.v30128120, pistato.v30249980 ... pistato.v30255160
Apiaceae	Apium graveolens	4	Ag1G00087, Ag2G02837, Ag3G02760, Ag4G00916
Arecaceae	Cocos nucifera	5	COCNU_03G016860, COCNU_13G001870, contig69552339G000010 ... scaffold005863G000020, scaffold012478G000010
Arecaceae	Phoenix dactylifera	4	gene-LOC103708749, gene-LOC103713471, gene-LOC103716313 ... gene-LOC103717836
Asparagaceae	Asparagus officinalis	7	AsparagusV1_01.2475.V1.1, AsparagusV1_02.2293.V1.1 ... AsparagusV1_03.1321.V1.1, AsparagusV1_04.3061.V1.1, AsparagusV1_06.1018.V1.1, AsparagusV1_06.1747.V1.1, AsparagusV1_08.2452.V1.1
Asteraceae	Flaveria trinervia	7	Ftri11G30672, Ftri13G30499, Ftri14G01702, Ftri18G06814 ... Ftri7G02724, Ftri7G15454, Ftri8G23876
Brassicaceae	Arabidopsis thaliana	4	AT2G26660.1, AT2G45130.1, AT5G15330.1, AT5G20150.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10014185m.g.v1.0, Thhalv10014356m.g.v1.0 ... Thhalv10016985m.g.v1.0, Thhalv10023655m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp4g09230.v2.2, Sp4g27190.v2.2, Sp6g24260.v2.2 ... Sp6g28730.v2.2
Brassicaceae	Brassica nigra	6	BniB01g001650.2N, BniB02g047500.2N, BniB05g043300.2N ... BniB08g010290.2N, BniB08g029390.2N, BniB08g032540.2N
Casuarinaceae	Casuarina equisetifolia	4	Ceq04G2335, Ceq05G1139, Ceq06G0628, Ceq08G0308
Casuarinaceae	Casuarina glauca	4	Cgl04G2540, Cgl05G1149, Cgl06G0647, Cgl08G0257
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno01g10110, gene.Cymno02g04110, gene.Cymno09g08860 ... gene.Cymno11g01780
Dunaliellaceae	Dunaliella salina	2	Dusal.0039s00001.v1.0, Dusal.1114s00001.v1.0
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate01g27280, gene.Thate03g00580, gene.Thate03g20620 ... gene.Thate03g26490
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-90
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG02.221, evm.TU.LG02.222, evm.TU.LG07.1442 ... evm.TU.LG07.958, evm.TU.LG07.959
Plantaginaceae	Plantago ovata	5	Pov_00005495, Pov_00013316, Pov_00014950, Pov_00028003 ... Pov_00032606
Plumbaginaceae	Limonium bicolor	6	Lb1G03875, Lb2G10812, Lb2G12673, Lb2G12679, Lb2G13081 ... Lb2G13084
Poaceae	Echinochloa crus-galli	19	AH01.2302, AH01.3348, AH01.450, AH02.1965, AH06.2227 ... AH07.756, BH01.2590, BH01.2618, BH01.291, BH01.3716, BH02.2018, BH06.2007, BH07.885, CH01.131, CH01.2615, CH01.3928, CH02.2182, CH06.2251, CH07.643
Poaceae	Eleusine coracana subsp. coracana	12	gene-QOZ80_1AG0020220, gene-QOZ80_1BG0070120 ... gene-QOZ80_2AG0105430, gene-QOZ80_2AG0123510, gene-QOZ80_2BG0158890, gene-QOZ80_2BG0178380, gene-QOZ80_3AG0209850, gene-QOZ80_3AG0251740, gene-QOZ80_3BG0255040, gene-QOZ80_3BG0276340, gene-QOZ80_6AG0544400, gene-QOZ80_6BG0497920
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.2HG0125510.1, HORVU.MOREX.r3.5HG0528310.1 ... HORVU.MOREX.r3.4HG0396980.1.CDS1, HORVU.MOREX.r3.7HG0719650.1, HORVU.MOREX.r3.7HG0750980.1
Poaceae	Lolium multiflorum	8	gene-QYE76_011168, gene-QYE76_016747, gene-QYE76_021397 ... gene-QYE76_034961, gene-QYE76_039718, gene-QYE76_039733, gene-QYE76_060550, gene-QYE76_067384
Poaceae	Oryza coarctata	11	Oco03G004580, Oco04G005310, Oco05G015610, Oco05G027860 ... Oco06G016130, Oco06G028840, Oco11G012350, Oco12G012530, Oco14G013310, Oco19G003440, Oco20G003480
Poaceae	Oryza sativa	5	LOC_Os02g10780.1, LOC_Os03g29250.1, LOC_Os03g61200.1 ... LOC_Os06g40120.1, LOC_Os10g25310.1
Poaceae	Paspalum vaginatum	7	gene-BS78_01G024900, gene-BS78_01G327300, gene-BS78_K056600 ... gene-BS78_03G167500, gene-BS78_04G078200, gene-BS78_10G184700, gene-BS78_K246600
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0105894, Pt_Chr0202080, Pt_Chr0202090, Pt_Chr0306264 ... Pt_Chr0306277, Pt_Chr0400644, Pt_Chr0400666
Poaceae	Sporobolus alterniflorus	17	Chr01G024430, Chr02G018170, Chr02G029830, Chr03G008110 ... Chr04G013100, Chr04G019150, Chr04G031820, Chr05G007500, Chr06G014670, Chr07G012560, Chr07G030850, Chr08G008900, Chr0G008070, Chr0G021840, Chr10G017600, Chr12G032770, Chr20G005320
Poaceae	Thinopyrum elongatum	6	Tel2E01G332800, Tel5E01G779900, Tel7E01G637900 ... Tel7E01G973300, Tel7E01G973600, Tel7E01G977000
Poaceae	Triticum dicoccoides	7	gene_TRIDC2AG021510, gene_TRIDC2BG025490 ... gene_TRIDC4AG054760, gene_TRIDC4AG065630, gene_TRIDC5BG075370, gene_TRIDC7AG052540, gene_TRIDC7BG044970
Poaceae	Triticum aestivum	16	TraesCS2A02G169600.1, TraesCS2B02G195900.1 ... TraesCS2D02G177100.1, TraesCS4A02G367200.1, TraesCS5B02G505400.1, TraesCS5D02G506200.1, TraesCS7A02G376200.1, TraesCS7A02G554000.1, TraesCS7A02G554100.1, TraesCS7A02G554800.1, TraesCS7B02G277700.1, TraesCS7B02G478000.1, TraesCS7D02G372600.1, TraesCS7D02G541100.1, TraesCS7D02G541600.1, TraesCSU02G094800.1
Poaceae	Zea mays	4	Zm00001eb048730_P001, Zm00001eb063280_P003 ... Zm00001eb162710_P001, Zm00001eb386270_P001
Poaceae	Zoysia japonica	9	nbis-gene-12115, nbis-gene-15553, nbis-gene-15554 ... nbis-gene-21396, nbis-gene-33446, nbis-gene-41066, nbis-gene-44051, nbis-gene-46689, nbis-gene-53100
Poaceae	Zoysia macrostachya	8	Zma_g1030, Zma_g10496, Zma_g129, Zma_g15153, Zma_g15987 ... Zma_g2452, Zma_g33034, Zma_g8019
Portulacaceae	Portulaca oleracea	4	evm.TU.LG02.1979, evm.TU.LG19.749, evm.TU.LG23.237 ... evm.TU.LG24.740
Posidoniaceae	Posidonia oceanica	5	gene.Posoc01g08440, gene.Posoc03g19780, gene.Posoc03g21020 ... gene.Posoc04g02980, gene.Posoc09g12650
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_10_RagTag.41, evm.TU.Scaffold_3_RagTag.1753 ... evm.TU.Scaffold_4_RagTag.2314, evm.TU.Scaffold_7_RagTag.202
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-12858, nbisL1-mrna-19519, nbisL1-mrna-28085
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-10505, nbisL1-mrna-10552, nbisL1-mrna-18369 ... nbisL1-mrna-21322
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-16480, nbisL1-mrna-2946, nbisL1-mrna-5057 ... nbisL1-mrna-7086
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000008l.1361, evm.TU.utg000019l.164 ... evm.TU.utg000028l.117, evm.TU.utg000033l.24
Rhizophoraceae	Kandelia obovata	4	Maker00001001, Maker00002243, Maker00010465, Maker00014921
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-12143, nbisL1-mrna-16748, nbisL1-mrna-1820 ... nbisL1-mrna-8077
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-14445, nbisL1-mrna-18263, nbisL1-mrna-22345 ... nbisL1-mrna-9757
Salicaceae	Populus euphratica	6	populus_peu00666, populus_peu04767, populus_peu05773 ... populus_peu11140, populus_peu12890, populus_peu31818
Solanaceae	Lycium barbarum	6	gene-LOC132600039, gene-LOC132606075, gene-LOC132621605 ... gene-LOC132635903, gene-LOC132636216, gene-LOC132636957
Solanaceae	Solanum chilense	3	SOLCI002968300, SOLCI003751600, SOLCI003851900
Solanaceae	Solanum pennellii	5	gene-LOC107005465, gene-LOC107008693, gene-LOC107009225 ... gene-LOC107027032, gene-LOC107030280
Tamaricaceae	Reaumuria soongarica	4	STRG.12113_chr02_-, STRG.602_chr01_-, gene_1521, gene_17260
Tamaricaceae	Tamarix chinensis	4	TC01G1269, TC01G1525, TC03G2625, TC10G1332
Zosteraceae	Zostera marina	3	Zosma01g07730.v3.1, Zosma01g17060.v3.1, Zosma05g32320.v3.1