Basic Information
Locus ID:
Chr12G030600
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 49994843 | 49998962 | - | Chr12G030600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 660 | 932 | 1.56224E-96 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 397 | 430 | 2.4E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 657 | 885 | 9.0E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 93 | 130 | 5.5E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 632 | 941 | 3.11E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 129 | 508 | 3.06E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 393 | 518 | 5.6E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 732 | 950 | 6.1E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 91 | 387 | 2.3E-67 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 616 | 731 | 6.2E-36 | - |
| SMART | SM00220 | serkin_6 | 654 | 940 | 2.7E-45 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 654 | 935 | 40.753281 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 779 | 791 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 660 | 682 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 987 | 1009 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_004981977.1 | receptor protein kinase TMK1 [Setaria italica] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WAL4 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_04866 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology