Basic Information
Locus ID:
Chr12G030440
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 49817940 | 49821223 | - | Chr12G030440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 127 | 187 | 6.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 75 | 2.9E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 388 | 648 | 6.7E-35 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 219 | 7.29E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 651 | 1.37E-54 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 149 | 224 | 8.5E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 460 | 670 | 4.2E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 148 | 1.5E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 361 | 459 | 7.8E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 385 | 654 | 29.912504 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 653 | 688 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | NP_001105207.2 | atypical receptor-like kinase MARK precursor [Zea mays] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WBM7 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_04890 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology