HalophFGD

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Basic Information
Locus ID: Chr12G030060
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000012 49275368 49276347 - Chr12G030060
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
RefSeq XP_040242205.1 uncharacterized protein LOC120962542 isoform X1 [Aegilops tauschii subsp. strangulata] 0
TrEMBL A0A5J9U6D9 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_34823 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 51 AH01.1015, AH01.1024, AH01.1124, AH01.1153, AH01.4125 ...
AH01.780, AH02.1490, AH03.332, AH04.548, AH05.1982, AH05.1998, BH01.1138, BH01.1156, BH01.1227, BH01.1228, BH01.1251, BH01.1255, BH01.1320, BH01.1323, BH01.733, BH02.1566, BH02.2878, BH04.1785, BH04.1985, BH04.2098, BH04.711, BH04.718, BH09.189, CH01.1212, CH01.1213, CH01.1296, CH01.1297, CH01.1298, CH01.1370, CH01.1701, CH01.1704, CH01.1851, CH01.1857, CH01.4167, CH01.4693, CH01.731, CH01.941, CH02.1709, CH02.3660, CH04.2428, CH04.592, CH05.1059, CH05.2658, CH09.1680, CH09.201, Contig309.89
Poaceae Eleusine coracana subsp. coracana 51 gene-QOZ80_3AG0214390, gene-QOZ80_3AG0216010 ...
gene-QOZ80_3AG0218380, gene-QOZ80_3AG0221420, gene-QOZ80_3AG0222470, gene-QOZ80_3AG0223650, gene-QOZ80_3AG0224920, gene-QOZ80_3AG0235940, gene-QOZ80_3AG0243540, gene-QOZ80_3AG0243570, gene-QOZ80_3AG0249230, gene-QOZ80_3BG0259470, gene-QOZ80_3BG0261290, gene-QOZ80_3BG0263620, gene-QOZ80_3BG0266550, gene-QOZ80_3BG0266560, gene-QOZ80_3BG0266860, gene-QOZ80_3BG0267300, gene-QOZ80_3BG0267480, gene-QOZ80_3BG0268430, gene-QOZ80_3BG0268570, gene-QOZ80_3BG0268700, gene-QOZ80_3BG0270180, gene-QOZ80_3BG0278950, gene-QOZ80_3BG0284660, gene-QOZ80_4AG0301210, gene-QOZ80_4AG0306520, gene-QOZ80_4AG0327400, gene-QOZ80_4AG0327410, gene-QOZ80_4BG0331950, gene-QOZ80_4BG0331960, gene-QOZ80_4BG0348650, gene-QOZ80_4BG0359340, gene-QOZ80_4BG0359350, gene-QOZ80_4BG0359360, gene-QOZ80_5AG0362010, gene-QOZ80_5AG0390790, gene-QOZ80_5BG0438870, gene-QOZ80_6AG0525610, gene-QOZ80_6AG0533630, gene-QOZ80_8AG0616010, gene-QOZ80_8AG0616390, gene-QOZ80_8AG0640640, gene-QOZ80_8AG0641140, gene-QOZ80_8BG0643460, gene-QOZ80_8BG0643930, gene-QOZ80_9AG0683810, gene-QOZ80_9AG0691240, gene-QOZ80_9BG0693890, gene-QOZ80_9BG0694470, gene-QOZ80_9BG0709820
Poaceae Hordeum vulgare 24 HORVU.MOREX.r3.1HG0064420.1, HORVU.MOREX.r3.2HG0106700.1 ...
HORVU.MOREX.r3.2HG0174920.1, HORVU.MOREX.r3.3HG0222660.1, HORVU.MOREX.r3.3HG0296840.1, HORVU.MOREX.r3.3HG0296850.1, HORVU.MOREX.r3.3HG0296880.1, HORVU.MOREX.r3.3HG0319310.1.CDS1, HORVU.MOREX.r3.3HG0324120.1, HORVU.MOREX.r3.4HG0334400.1, HORVU.MOREX.r3.4HG0342960.1, HORVU.MOREX.r3.4HG0386520.1, HORVU.MOREX.r3.5HG0427890.1, HORVU.MOREX.r3.5HG0441400.1, HORVU.MOREX.r3.5HG0493980.1.CDS1, HORVU.MOREX.r3.5HG0493990.1, HORVU.MOREX.r3.5HG0510610.1.CDS1, HORVU.MOREX.r3.6HG0542900.1, HORVU.MOREX.r3.6HG0542910.1.CDS1, HORVU.MOREX.r3.6HG0550730.1, HORVU.MOREX.r3.7HG0646860.1, HORVU.MOREX.r3.7HG0646870.1.CDS1, HORVU.MOREX.r3.7HG0648070.1, HORVU.MOREX.r3.7HG0650800.1
Poaceae Lolium multiflorum 83 gene-QYE76_000591, gene-QYE76_000593, gene-QYE76_000599 ...
gene-QYE76_000617, gene-QYE76_000618, gene-QYE76_000619, gene-QYE76_000629, gene-QYE76_000630, gene-QYE76_000631, gene-QYE76_000632, gene-QYE76_000634, gene-QYE76_000642, gene-QYE76_007963, gene-QYE76_007964, gene-QYE76_007965, gene-QYE76_007966, gene-QYE76_007967, gene-QYE76_007969, gene-QYE76_007970, gene-QYE76_008050, gene-QYE76_013106, gene-QYE76_013107, gene-QYE76_013108, gene-QYE76_013109, gene-QYE76_014130, gene-QYE76_014455, gene-QYE76_015870, gene-QYE76_015915, gene-QYE76_016195, gene-QYE76_016783, gene-QYE76_017868, gene-QYE76_018486, gene-QYE76_019415, gene-QYE76_019426, gene-QYE76_019680, gene-QYE76_019685, gene-QYE76_019690, gene-QYE76_020540, gene-QYE76_023403, gene-QYE76_026090, gene-QYE76_026091, gene-QYE76_026098, gene-QYE76_026275, gene-QYE76_026284, gene-QYE76_026285, gene-QYE76_034672, gene-QYE76_035480, gene-QYE76_035574, gene-QYE76_036662, gene-QYE76_037521, gene-QYE76_037664, gene-QYE76_038920, gene-QYE76_039204, gene-QYE76_039205, gene-QYE76_044112, gene-QYE76_047575, gene-QYE76_051552, gene-QYE76_057287, gene-QYE76_057978, gene-QYE76_058361, gene-QYE76_059052, gene-QYE76_059842, gene-QYE76_062412, gene-QYE76_062897, gene-QYE76_063023, gene-QYE76_063027, gene-QYE76_063055, gene-QYE76_063074, gene-QYE76_063076, gene-QYE76_063178, gene-QYE76_063475, gene-QYE76_063486, gene-QYE76_063621, gene-QYE76_063983, gene-QYE76_063984, gene-QYE76_064964, gene-QYE76_064965, gene-QYE76_064967, gene-QYE76_067644, gene-QYE76_068082, gene-QYE76_069230, gene-QYE76_070535, gene-QYE76_071537
Poaceae Oryza coarctata 20 Oco02G024440, Oco05G010060, Oco05G019260, Oco05G019790 ...
Oco05G019870, Oco05G019880, Oco05G019900, Oco06G020690, Oco07G009270, Oco12G010210, Oco14G002850, Oco14G010420, Oco16G013130, Oco20G009680, Oco21G003930, Oco21G008790, Oco22G004760, Oco22G010070, Oco22G010080, Oco24G002600
Poaceae Oryza sativa 31 LOC_Os01g60920.1, LOC_Os02g05600.1, LOC_Os03g24200.1 ...
LOC_Os03g43060.1, LOC_Os03g43330.1, LOC_Os03g44920.1, LOC_Os03g44980.1, LOC_Os03g46120.1, LOC_Os03g46140.1, LOC_Os03g46500.1, LOC_Os03g46510.1, LOC_Os03g46530.1, LOC_Os03g46690.1, LOC_Os03g46720.1, LOC_Os03g47360.1, LOC_Os03g47420.1, LOC_Os04g02280.1, LOC_Os06g41520.1, LOC_Os07g09110.1, LOC_Os07g27030.1, LOC_Os07g37080.1, LOC_Os08g13050.1, LOC_Os08g27190.1, LOC_Os08g43220.1, LOC_Os10g24010.1, LOC_Os11g41550.1, LOC_Os11g41560.1, LOC_Os11g41570.1, LOC_Os11g41590.1, LOC_Os12g43730.1, LOC_Os12g43770.1
Poaceae Paspalum vaginatum 24 gene-BS78_01G016600, gene-BS78_01G099800, gene-BS78_K137800 ...
gene-BS78_01G115500, gene-BS78_01G123600, gene-BS78_01G131900, gene-BS78_01G167200, gene-BS78_01G224500, gene-BS78_02G322600, gene-BS78_04G000600, gene-BS78_04G086000, gene-BS78_04G233400, gene-BS78_05G091600, gene-BS78_05G091900, gene-BS78_05G232600, gene-BS78_05G232800, gene-BS78_05G232900, gene-BS78_06G017800, gene-BS78_06G017900, gene-BS78_06G236200, gene-BS78_08G023500, gene-BS78_10G185800, gene-BS78_10G274200, gene-BS78_K331500
Poaceae Puccinellia tenuiflora 56 Pt_Chr0100042, Pt_Chr0101157, Pt_Chr0102105, Pt_Chr0102106 ...
Pt_Chr0103013, Pt_Chr0103031, Pt_Chr0104520, Pt_Chr0104576, Pt_Chr0104613, Pt_Chr0104660, Pt_Chr0104662, Pt_Chr0104663, Pt_Chr0104692, Pt_Chr0106586, Pt_Chr0106611, Pt_Chr0107485, Pt_Chr0200583, Pt_Chr0200585, Pt_Chr0200594, Pt_Chr0200788, Pt_Chr0201674, Pt_Chr0201677, Pt_Chr0202451, Pt_Chr0202466, Pt_Chr0202481, Pt_Chr0202708, Pt_Chr0202917, Pt_Chr0202918, Pt_Chr0206545, Pt_Chr0206546, Pt_Chr0206660, Pt_Chr0206661, Pt_Chr0207352, Pt_Chr0305560, Pt_Chr0307464, Pt_Chr0400254, Pt_Chr0401578, Pt_Chr0401581, Pt_Chr0401597, Pt_Chr0503938, Pt_Chr0504167, Pt_Chr0505255, Pt_Chr0505793, Pt_Chr0505817, Pt_Chr0601011, Pt_Chr0601180, Pt_Chr0604537, Pt_Chr0605437, Pt_Chr0605629, Pt_Chr0700735, Pt_Chr0701166, Pt_Chr0701307, Pt_Chr0701641, Pt_Chr0703699, Pt_Chr0703736, Pt_Chr0704236
Poaceae Sporobolus alterniflorus 23 Chr01G007400, Chr01G016030, Chr01G016370, Chr04G008150 ...
Chr07G003500, Chr07G014660, Chr07G014680, Chr12G020700, Chr12G028590, Chr12G030060, Chr12G030070, Chr16G007830, Chr16G007850, Chr19G010920, Chr19G011300, Chr23G005890, Chr23G018410, Chr26G001370, Chr26G013720, Chr27G004830, Chr27G005170, Chr27G005190, Chr31G007990
Poaceae Thinopyrum elongatum 34 Tel1E01G406000, Tel1E01G430200, Tel1E01G452100 ...
Tel1E01G565900, Tel1E01G566100, Tel1E01G664200, Tel1E01G734700, Tel2E01G006200, Tel2E01G283700, Tel2E01G398000, Tel2E01G993300, Tel3E01G288000, Tel3E01G421100, Tel3E01G832000, Tel3E01G832800, Tel3E01G833100, Tel4E01G050500, Tel4E01G189400, Tel4E01G357100, Tel4E01G377200, Tel4E01G607800, Tel5E01G090700, Tel5E01G091000, Tel5E01G131000, Tel5E01G159600, Tel5E01G454300, Tel6E01G018600, Tel6E01G141200, Tel6E01G178200, Tel7E01G174400, Tel7E01G176700, Tel7E01G204600, Tel7E01G275500, Tel7E01G357400
Poaceae Triticum dicoccoides 9 gene_TRIDC1AG041310, gene_TRIDC1AG041320 ...
gene_TRIDC1BG068810, gene_TRIDC2BG021220, gene_TRIDC3AG071700, gene_TRIDC4BG036330, gene_TRIDC5AG005740, gene_TRIDC5BG006350, gene_TRIDC7AG008390
Poaceae Triticum aestivum 104 TraesCS1A02G261100.1, TraesCS1A02G277800.1 ...
TraesCS1A02G336200.1, TraesCS1A02G336500.1, TraesCS1A02G336700.1, TraesCS1A02G337100.1, TraesCS1A02G420400.1, TraesCS1B02G256800.1, TraesCS1B02G271900.1, TraesCS1B02G286700.1, TraesCS1B02G305400.1, TraesCS1B02G349700.1, TraesCS1B02G439500.1.cds1, TraesCS1D02G261100.1, TraesCS1D02G277000.1, TraesCS1D02G414000.1.cds1, TraesCS1D02G416500.1.cds1, TraesCS1D02G416600.1.cds1, TraesCS2A02G074200.1, TraesCS2A02G074300.1, TraesCS2A02G074400.1, TraesCS2B02G089300.1, TraesCS2B02G089400.1, TraesCS2B02G112900.1.cds1, TraesCS2B02G163700.1, TraesCS2B02G165800.1, TraesCS2B02G208300.1, TraesCS3A02G047300.1, TraesCS3B02G035300.1, TraesCS3B02G035500.1, TraesCS3B02G036300.1, TraesCS3B02G173100.1, TraesCS3B02G278800.1, TraesCS3B02G569600.1, TraesCS3D02G032600.1, TraesCS3D02G154900.1, TraesCS3D02G249700.1, TraesCS3D02G479600.1, TraesCS4A02G088900.1, TraesCS4A02G102800.1, TraesCS4A02G196700.1, TraesCS4A02G234900.1, TraesCS4A02G289100.1, TraesCS4A02G372700.1, TraesCS4A02G399100.1, TraesCS4B02G080100.1, TraesCS4B02G118600.1, TraesCS4B02G201700.1, TraesCS4B02G215400.1, TraesCS4D02G022900.1, TraesCS4D02G023000.1.cds1, TraesCS4D02G023300.1.cds1, TraesCS4D02G079000.1, TraesCS4D02G116300.1, TraesCS4D02G202400.1, TraesCS4D02G215900.1, TraesCS5A02G037300.1, TraesCS5A02G061300.1, TraesCS5A02G061400.1.cds1, TraesCS5A02G080400.1, TraesCS5A02G255400.1, TraesCS5A02G388600.1.cds1, TraesCS5A02G541600.1.cds1, TraesCS5A02G541700.1, TraesCS5A02G551800.1, TraesCS5B02G038200.1, TraesCS5B02G085700.1, TraesCS5B02G393600.1, TraesCS5D02G012700.1.cds1, TraesCS5D02G072800.1, TraesCS5D02G072900.1, TraesCS5D02G073000.2, TraesCS5D02G092100.1, TraesCS5D02G263900.1, TraesCS5D02G292600.1, TraesCS5D02G398600.1, TraesCS6A02G010000.1, TraesCS6A02G026000.1.cds1, TraesCS6A02G055800.1, TraesCS6A02G076500.1, TraesCS6A02G076600.1, TraesCS6B02G006700.1.cds1, TraesCS6B02G039600.1, TraesCS6B02G076500.1, TraesCS6B02G102500.1, TraesCS6B02G102600.1, TraesCS6B02G102700.1, TraesCS6B02G102800.1, TraesCS6D02G004100.1, TraesCS6D02G031000.1, TraesCS6D02G155900.1, TraesCS7A02G101100.1, TraesCS7B02G100900.1, TraesCS7D02G095200.1, TraesCSU02G004800.1.cds1, TraesCSU02G027200.1, TraesCSU02G027300.1, TraesCSU02G027400.1, TraesCSU02G071700.1, TraesCSU02G120200.1, TraesCSU02G120300.1, TraesCSU02G174700.1, TraesCSU02G218100.1.cds1, TraesCSU02G250100.1
Poaceae Zea mays 4 Zm00001eb116750_P003, Zm00001eb312670_P001 ...
Zm00001eb312730_P004, Zm00001eb312790_P001
Poaceae Zoysia japonica 15 nbis-gene-1093, nbis-gene-1480, nbis-gene-18257 ...
nbis-gene-2031, nbis-gene-20371, nbis-gene-3241, nbis-gene-49207, nbis-gene-51459, nbis-gene-51460, nbis-gene-51491, nbis-gene-51499, nbis-gene-52523, nbis-gene-53528, nbis-gene-53908, nbis-gene-53909
Poaceae Zoysia macrostachya 5 Zma_g1493, Zma_g17638, Zma_g19242, Zma_g19259, Zma_g19260
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