Basic Information
Locus ID:
Chr12G029350
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 48656429 | 48666706 | + | Chr12G029350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 279 | 576 | 2.75431E-127 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 248 | 563 | 1.3E-94 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 279 | 586 | 9.0E-70 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 281 | 579 | 2.0E-43 | IPR029044 |
| Coils | Coil | Coil | 158 | 178 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_039780951.1 | polygalacturonate 4-alpha-galacturonosyltransferase-like [Panicum virgatum] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6S6T3 | Hexosyltransferase OS=Panicum miliaceum OX=4540 GN=C2845_PM02G02190 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology