halophFGD

Basic Information

Locus ID: Chr12G027310

Species & Taxonomic ID: Sporobolus alterniflorus & 29706

Genome Assembly: GWHCBIM00000000

Description: KIP1-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
GWHCBIM00000012	46053653	46060700	-	Chr12G027310

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
0.00	0.00 Da	0.00	0.00	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07765	KIP1-like protein	14	87	7.8E-36	IPR011684
ProSiteProfiles	PS51774	Networked (NET) actin-binding (NAB) domain profile.	13	93	49.278641	IPR011684
Coils	Coil	Coil	592	633	-	-
Coils	Coil	Coil	1104	1124	-	-
Coils	Coil	Coil	820	872	-	-
Coils	Coil	Coil	796	816	-	-
Coils	Coil	Coil	1132	1152	-	-
Coils	Coil	Coil	1393	1413	-	-
Coils	Coil	Coil	550	584	-	-
Coils	Coil	Coil	473	514	-	-
Coils	Coil	Coil	337	364	-	-
Coils	Coil	Coil	246	313	-	-
Coils	Coil	Coil	1364	1384	-	-
Coils	Coil	Coil	372	458	-	-
Coils	Coil	Coil	1442	1469	-	-
Coils	Coil	Coil	155	238	-	-

Gene Ontology

Molecular Function:

GO:0003779 (actin binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G03080.1	kinase interacting (KIP1-like) family protein.
RefSeq	XP_034571962.1	protein NETWORKED 1A-like [Setaria viridis]
Swiss-Prot	F4HZB5	Protein NETWORKED 1D OS=Arabidopsis thaliana OX=3702 GN=NET1D PE=3 SV=1
TrEMBL	A0A4U6SVC7	NAB domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G159800v2 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	11	jg11153, jg12593, jg27868, jg35332, jg35342, jg35343, jg5755 ... jg8768, jg8769, jg8772, jg8773
Aizoaceae	Mesembryanthemum crystallinum	2	gene_13546, gene_15535
Amaranthaceae	Atriplex hortensis	1	Ah000337
Amaranthaceae	Beta vulgaris	1	BVRB_5g119750
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg30762, Sbi_jg51788, Sbi_jg5526, Sbi_jg58496
Amaranthaceae	Salicornia europaea	2	Seu_jg13373, Seu_jg28368
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00004942, GOSA_00020301
Amaranthaceae	Suaeda glauca	4	Sgl04432, Sgl09503, Sgl53769, Sgl59033
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000005319, gene:ENSEOMG00000007845 ... gene:ENSEOMG00000009846, gene:ENSEOMG00000022748, gene:ENSEOMG00000023186, gene:ENSEOMG00000029781, gene:ENSEOMG00000045649
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.3AG0014870, CQ.Regalona.r1.3BG0015130 ... CQ.Regalona.r1.5AG0025140, CQ.Regalona.r1.5BG0026650
Anacardiaceae	Pistacia vera	3	pistato.v30026780, pistato.v30109790, pistato.v30236420
Apiaceae	Apium graveolens	7	Ag10G00717, Ag11G04090, Ag1G01840, Ag5G02517, Ag5G02518 ... AgUnG01294, AgUnG01477
Arecaceae	Cocos nucifera	4	COCNU_03G001360, COCNU_06G015610, COCNU_08G000860 ... COCNU_14G011460
Arecaceae	Phoenix dactylifera	4	gene-LOC103704582, gene-LOC103707334, gene-LOC103718097 ... gene-LOC103723807
Asparagaceae	Asparagus officinalis	2	AsparagusV1_03.531.V1.1, AsparagusV1_08.1877.V1.1
Asteraceae	Flaveria trinervia	3	Ftri11G13138, Ftri12G25254, Ftri12G33378
Brassicaceae	Arabidopsis thaliana	4	AT1G03080.1, AT3G22790.1, AT4G02710.1, AT4G14760.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10006534m.g.v1.0, Thhalv10019883m.g.v1.0 ... Thhalv10024203m.g.v1.0, Thhalv10028372m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g02080.v2.2, Sp3g20490.v2.2, Sp7g12890.v2.2
Brassicaceae	Brassica nigra	10	BniB01g027290.2N, BniB01g039680.2N, BniB02g001100.2N ... BniB03g038510.2N, BniB03g038530.2N, BniB03g038540.2N, BniB03g038550.2N, BniB05g021330.2N, BniB07g049070.2N, BniB08g045350.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq06G2085, Ceq07G0329
Casuarinaceae	Casuarina glauca	2	Cgl06G2199, Cgl07G0337
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno01g00940, gene.Cymno06g13390
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate02g15190, gene.Thate02g28540, gene.Thate08g10660
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-6316, nbisL1-mrna-9674
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG04.1125, evm.TU.LG11.989
Plantaginaceae	Plantago ovata	2	Pov_00025927, Pov_00035226
Plumbaginaceae	Limonium bicolor	6	Lb1G08038, Lb1G08042, Lb2G10338, Lb3G18430, Lb5G28932 ... Lb5G28933
Poaceae	Echinochloa crus-galli	9	AH01.1224, AH01.1883, AH05.3993, BH01.1499, BH01.2356 ... BH05.4083, CH01.2440, CH05.4302, CH06.2621
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_2AG0124930, gene-QOZ80_2BG0180530 ... gene-QOZ80_3AG0224770, gene-QOZ80_3BG0270020, gene-QOZ80_5AG0397180, gene-QOZ80_5BG0445670
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0037250.1, HORVU.MOREX.r3.4HG0402000.1 ... HORVU.MOREX.r3.5HG0432280.1, HORVU.MOREX.r3.5HG0508870.1
Poaceae	Lolium multiflorum	7	gene-QYE76_000759, gene-QYE76_045157, gene-QYE76_045227 ... gene-QYE76_063492, gene-QYE76_070585, gene-QYE76_070611, gene-QYE76_070612
Poaceae	Oryza coarctata	8	Oco05G003510, Oco05G018670, Oco06G003570, Oco06G019450 ... Oco19G004480, Oco20G004450, Oco23G010040, Oco24G009790
Poaceae	Oryza sativa	4	LOC_Os03g06510.1, LOC_Os03g43684.1, LOC_Os10g28610.1 ... LOC_Os12g41200.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G147100, gene-BS78_01G230700 ... gene-BS78_08G138700
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0101211, Pt_Chr0104459, Pt_Chr0502410, Pt_Chr0704322
Poaceae	Sporobolus alterniflorus	12	Chr01G009710, Chr04G018690, Chr04G024700, Chr06G014010 ... Chr06G019480, Chr07G023480, Chr09G009440, Chr12G027310, Chr13G015630, Chr15G014790, Chr19G007950, Chr27G008700
Poaceae	Thinopyrum elongatum	4	Tel1E01G259400, Tel4E01G464400, Tel5E01G119900 ... Tel5E01G600300
Poaceae	Triticum dicoccoides	8	gene_TRIDC1AG020790, gene_TRIDC1BG024500 ... gene_TRIDC4AG003970, gene_TRIDC4BG047750, gene_TRIDC5AG008260, gene_TRIDC5AG055200, gene_TRIDC5BG010210, gene_TRIDC5BG059210
Poaceae	Triticum aestivum	12	TraesCS1A02G138400.1, TraesCS1B02G152200.2 ... TraesCS1D02G135200.2, TraesCS4A02G029000.1, TraesCS4B02G276800.2, TraesCS4D02G275400.1, TraesCS5A02G054300.1, TraesCS5A02G377100.1, TraesCS5B02G062100.1, TraesCS5B02G380700.1, TraesCS5D02G065600.1, TraesCS5D02G387100.1
Poaceae	Zea mays	7	Zm00001eb031290_P001, Zm00001eb047830_P003 ... Zm00001eb050880_P001, Zm00001eb135720_P002, Zm00001eb222880_P001, Zm00001eb222900_P001, Zm00001eb222910_P001
Poaceae	Zoysia japonica	4	nbis-gene-28005, nbis-gene-39648, nbis-gene-44566 ... nbis-gene-47555
Poaceae	Zoysia macrostachya	5	Zma_g13268, Zma_g16063, Zma_g25304, Zma_g26097, Zma_g899
Portulacaceae	Portulaca oleracea	6	evm.TU.LG01.2325, evm.TU.LG02.1105, evm.TU.LG03.2120 ... evm.TU.LG06.1785, evm.TU.LG09.870, evm.TU.LG11.1138
Posidoniaceae	Posidonia oceanica	1	gene.Posoc03g01970
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_3_RagTag.412, evm.TU.Scaffold_5_RagTag.1016 ... evm.TU.Scaffold_6_RagTag.780, evm.TU.Scaffold_9_RagTag.939
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-11331, nbisL1-mrna-1508, nbisL1-mrna-15916 ... nbisL1-mrna-21270
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-16770, nbisL1-mrna-18846, nbisL1-mrna-19887 ... nbisL1-mrna-7033
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-10365, nbisL1-mrna-18373, nbisL1-mrna-6148 ... nbisL1-mrna-653
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000003l.510, evm.TU.utg000006l.324 ... evm.TU.utg000011l.476, evm.TU.utg000019l.973
Rhizophoraceae	Kandelia obovata	4	Maker00007956, Maker00009159, Maker00012917, Maker00013550
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-1497, nbisL1-mrna-15291, nbisL1-mrna-9964
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-3503, nbisL1-mrna-3504, nbisL1-mrna-5117 ... nbisL1-mrna-7637
Salicaceae	Populus euphratica	10	populus_peu07415, populus_peu15077, populus_peu15078 ... populus_peu15079, populus_peu15080, populus_peu21426, populus_peu21427, populus_peu21428, populus_peu21429, populus_peu32739
Solanaceae	Lycium barbarum	3	gene-LOC132610256, gene-LOC132610825, gene-LOC132635420
Solanaceae	Solanum chilense	3	SOLCI002373800, SOLCI005846500, SOLCI006862000
Solanaceae	Solanum pennellii	3	gene-LOC107001225, gene-LOC107030912, gene-LOC107030962
Tamaricaceae	Reaumuria soongarica	3	STRG.2243_chr01_-, STRG.4016_chr02_+, gene_16425
Tamaricaceae	Tamarix chinensis	4	TC01G0823, TC02G0203, TC07G2651, TC12G1370
Zosteraceae	Zostera marina	3	Zosma04g00410.v3.1, Zosma05g28500.v3.1, Zosma06g26440.v3.1