Basic Information
Locus ID:
Chr12G026340
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Cytochrome C oxidase copper chaperone (COX17)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 44615106 | 44615402 | + | Chr12G026340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53030.1 | Cytochrome C oxidase copper chaperone (COX17). encodes a copper chaperone, can functional complements the yeast COX17 null mutant. May play a role in the delivery of copper to mitochondria. Expressed in roots and thus may also play a role in copper transport in the roots. | 0 |
| RefSeq | XP_025802720.1 | cytochrome c oxidase copper chaperone 2-like [Panicum hallii] | 0 |
| Q94FT1 | Cytochrome c oxidase copper chaperone 2 OS=Arabidopsis thaliana OX=3702 GN=COX17-2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1E5W184 | Cytochrome c oxidase copper chaperone 1-like OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0007880 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg19474, jg38287 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_7450 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah008160 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg18660 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg4916 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl28259 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30265830 |
| Apiaceae | Apium graveolens | 2 | Ag2G01590, Ag3G00377 |
| Arecaceae | Cocos nucifera | 1 | COCNU_01G005010 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103717196, gene-LOC120106193 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.3421.V1.1, AsparagusV1_05.1763.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri7G07985 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G53030.1, AT3G15352.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10011917m.g.v1.0, Thhalv10021884m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g13580.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB07g054330.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G1033 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl01G1145, Cgl01G1204 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.1013s00003.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g02760 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-1079, nbisL1-mrna-8289 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00031346 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb5G27629 |
| Poaceae | Echinochloa crus-galli | 2 | AH03.1943, BH03.1988 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0148860, gene-QOZ80_2BG0205350 ... |
| Poaceae | Oryza coarctata | 2 | Oco17G005050, Oco18G005090 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g55134.1, LOC_Os09g25314.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G184900, gene-BS78_04G304900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0702169 |
| Poaceae | Sporobolus alterniflorus | 8 | Chr09G003130, Chr09G017780, Chr12G026340, Chr13G001970 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G366800 |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC5AG035860, gene_TRIDC5BG037730 ... |
| Poaceae | Triticum aestivum | 8 | TraesCS5A02G224100.1.cds1, TraesCS5B02G222900.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb312990_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-20056, nbis-gene-39932 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g17324, Zma_g32403 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g37430, gene.Posoc02g07530 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-11239, nbisL1-mrna-21871, nbisL1-mrna-21873 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-16856 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-10583 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-7089 |
| Salicaceae | Populus euphratica | 2 | populus_peu00521, populus_peu17580 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132618387, gene-LOC132628820 |
| Solanaceae | Solanum chilense | 2 | SOLCI002996600, SOLCI006692600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107002572, gene-LOC107024590 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_15495, gene_17836 |
| Tamaricaceae | Tamarix chinensis | 2 | TC06G0335, TC06G0356 |
| Zosteraceae | Zostera marina | 1 | Zosma01g20710.v3.1 |