Basic Information
Locus ID:
Chr12G025550
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 43480753 | 43482251 | - | Chr12G025550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53697 | SIS domain | 69 | 140 | 2.78E-6 | - |
| Gene3D | G3DSA:3.40.50.10490 | - | 70 | 141 | 1.8E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 55 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46700.1 | CDPK-related kinase 3. | 0 |
| RefSeq | XP_025811702.1 | CDPK-related kinase 3-like isoform X2 [Panicum hallii] | 0 |
| Q9ZUZ2 | CDPK-related kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453SGU0 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah026154 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000031586 |
| Arecaceae | Cocos nucifera | 1 | COCNU_09G001000 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr12G025550, Chr20G005450 |
| Poaceae | Thinopyrum elongatum | 6 | Tel3E01G186100, Tel3E01G532600, Tel3E01G837000 ... |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2BG076670 |
| Poaceae | Zea mays | 3 | Zm00001eb092830_P001, Zm00001eb180840_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-54473, nbis-gene-9572 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12207 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5699 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011417 |
| Salicaceae | Populus euphratica | 1 | populus_peu14330 |