Basic Information
Locus ID:
Chr12G024460
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 42163721 | 42168429 | - | Chr12G024460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 720 | 968 | 4.03244E-129 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1113 | 1377 | 1.7E-125 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 751 | 887 | 1.4E-22 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 748 | 886 | 2.98E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 721 | 971 | 1.2E-58 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 630 | 1382 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 748 | 977 | 29.882839 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 641 | 658 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 590 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 573 | 590 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 501 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 636 | 658 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 550 | 572 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 397 | - | - |
| Coils | Coil | Coil | 97 | 117 | - | - |
| Coils | Coil | Coil | 1071 | 1091 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_002440611.1 | translocase of chloroplast 159, chloroplastic [Sorghum bicolor] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811RQI2 | AIG1-type G domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS56129 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology