Basic Information
Locus ID:
Chr12G014660
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 22992061 | 23006274 | + | Chr12G014660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 586 | 813 | 2.6E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 66 | 6.0E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 542 | 849 | 4.78E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 65 | 384 | 1.13E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 630 | 834 | 3.9E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 529 | 629 | 6.1E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 200 | 273 | 1.9E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 197 | 1.8E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 274 | 395 | 2.4E-12 | IPR032675 |
| SMART | SM00220 | serkin_6 | 556 | 817 | 1.5E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 556 | 817 | 33.771088 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 251 | 273 | 7.889071 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 674 | 686 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025807872.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Panicum hallii] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1Z5R1F4 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3009G079300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology