Basic Information
Locus ID:
Chr12G011750
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 13183927 | 13186527 | + | Chr12G011750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 16 | 316 | 3.5E-75 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 11 | 320 | 8.37E-81 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 4 | 315 | 4.6E-99 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 3 | 255 | 1.1E-6 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 273 | 323 | 1.2 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 3 | 317 | 50.199059 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_025795721.1 | homocysteine S-methyltransferase 1 [Panicum hallii] | 0 |
| Q9FUN0 | Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2S3IT78 | Hcy-binding domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G550900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology