Basic Information
Locus ID:
Chr12G011270
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 12339764 | 12343187 | - | Chr12G011270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 64 | 6.9E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 82 | 127 | 5.2E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 374 | 633 | 1.6E-32 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 211 | 1.32E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 375 | 634 | 1.66E-54 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 357 | 445 | 7.5E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 657 | 2.3E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 138 | 2.7E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 227 | 3.9E-15 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 371 | 645 | 29.304741 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 377 | 399 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 655 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 661 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_039779240.1 | probable inactive receptor kinase At1g48480 [Panicum virgatum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WI35 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_07494 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology