Basic Information
Locus ID:
Chr12G006360
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
NIN1
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 5923500 | 5929906 | + | Chr12G006360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 155 | 596 | 3.3E-217 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 158 | 588 | 5.39E-54 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 180 | 584 | 1.1E-14 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 111 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56560.1 | Plant neutral invertase family protein. | 0 |
| RefSeq | XP_002465359.1 | neutral/alkaline invertase 1, mitochondrial [Sorghum bicolor] | 0 |
| Q10MC0 | Neutral/alkaline invertase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=NIN1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811MUZ3 | Alkaline/neutral invertase OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS6977 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology