Basic Information
Locus ID:
Chr12G005770
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 5150344 | 5155025 | - | Chr12G005770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 643 | 908 | 1.62804E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 641 | 906 | 4.3E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 622 | 917 | 1.5E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 74 | 388 | 9.07E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 195 | 6.6E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 413 | 3.9E-36 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 609 | 712 | 2.1E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 713 | 932 | 1.6E-55 | - |
| SMART | SM00220 | serkin_6 | 637 | 910 | 8.8E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 637 | 911 | 38.562511 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 643 | 665 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 757 | 769 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 915 | 931 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 932 | 955 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 915 | 955 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_012698411.2 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Setaria italica] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WGP1 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_06792 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology