Basic Information
Locus ID:
Chr12G005670
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the cytochrome P450 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 5076152 | 5083424 | + | Chr12G005670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00067 | Cytochrome P450 | 146 | 539 | 1.8E-75 | IPR001128 |
| SUPERFAMILY | SSF48264 | Cytochrome P450 | 145 | 553 | 3.67E-92 | IPR036396 |
| Gene3D | G3DSA:1.10.630.10 | Cytochrome P450 | 39 | 555 | 5.1E-97 | IPR036396 |
| ProSitePatterns | PS00086 | Cytochrome P450 cysteine heme-iron ligand signature. | 496 | 505 | - | IPR017972 |
| PRINTS | PR00463 | E-class P450 group I signature | 142 | 161 | 9.3E-15 | IPR002401 |
| PRINTS | PR00463 | E-class P450 group I signature | 493 | 503 | 9.3E-15 | IPR002401 |
| PRINTS | PR00463 | E-class P450 group I signature | 503 | 526 | 9.3E-15 | IPR002401 |
| PRINTS | PR00463 | E-class P450 group I signature | 378 | 404 | 9.3E-15 | IPR002401 |
| PRINTS | PR00385 | P450 superfamily signature | 421 | 432 | 2.2E-13 | IPR001128 |
| PRINTS | PR00385 | P450 superfamily signature | 369 | 386 | 2.2E-13 | IPR001128 |
| PRINTS | PR00385 | P450 superfamily signature | 503 | 514 | 2.2E-13 | IPR001128 |
| PRINTS | PR00463 | E-class P450 group I signature | 358 | 375 | 9.3E-15 | IPR002401 |
| PRINTS | PR00385 | P450 superfamily signature | 494 | 503 | 2.2E-13 | IPR001128 |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24910.1 | cytochrome P450, family 714, subfamily A, polypeptide 1. member of CYP714A | 0 |
| RefSeq | XP_004984493.1 | cytochrome P450 714B3 [Setaria italica] | 0 |
| B6SSW8 | Cytochrome P450 714B3 OS=Zea mays OX=4577 GN=CYP714B3 PE=2 SV=1 | 0 | |
| TrEMBL | K4A8I8 | Cytochrome P450 OS=Setaria italica OX=4555 GN=101769612 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology