halophFGD

Basic Information

Locus ID: Chr12G004560

Species & Taxonomic ID: Sporobolus alterniflorus & 29706

Genome Assembly: GWHCBIM00000000

Description: Protein kinase domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
GWHCBIM00000012	4059962	4061023	-	Chr12G004560

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
0.00	0.00 Da	0.00	0.00	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	22	74	5.6E-7	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	22	74	1.29E-7	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	5	75	8.6E-13	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G42960.2	-
RefSeq	NP_001142269.1	Probable serine/threonine-protein kinase At1g01540 [Zea mays]
Swiss-Prot	Q3EDL4	Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2
TrEMBL	A0A835ETZ8	Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_027243 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Brassicaceae	Brassica nigra	1	BniB02g004720.2N
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate02g23980
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-3918, nbisL1-mrna-9040
Poaceae	Sporobolus alterniflorus	1	Chr12G004560
Poaceae	Zoysia japonica	1	nbis-gene-56584