halophFGD

Basic Information

Locus ID: Chr11G023700

Species & Taxonomic ID: Sporobolus alterniflorus & 29706

Genome Assembly: GWHCBIM00000000

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
GWHCBIM00000011	52017743	52018589	-	Chr11G023700

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
0.00	0.00 Da	0.00	0.00	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	41	68	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	38	75	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_006655756.1	uncharacterized protein LOC102718181 [Oryza brachyantha]	0
TrEMBL	A0A0A8XXH8	Secreted protein OS=Arundo donax OX=35708 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg2117, jg2123, jg2129, jg3702
Amaranthaceae	Atriplex hortensis	1	Ah018506
Amaranthaceae	Salicornia bigelovii	1	Sbi_jg25601
Amaranthaceae	Salicornia europaea	1	Seu_jg26290
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00017844
Amaranthaceae	Suaeda glauca	3	Sgl01218, Sgl01219, Sgl06304
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.3AG0006070, CQ.Regalona.r1.3BG0006200
Apiaceae	Apium graveolens	2	Ag10G02479, Ag4G02611
Arecaceae	Cocos nucifera	4	COCNU_07G001830, COCNU_10G001290, COCNU_10G001300 ... COCNU_10G001310
Asteraceae	Flaveria trinervia	4	Ftri14G10312, Ftri4G32310, Ftri7G04480, Ftri7G22626
Brassicaceae	Arabidopsis thaliana	3	AT1G32920.1, AT1G32928.1, AT5G54165.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10009230m.g.v1.0, Thhalv10009241m.g.v1.0 ... Thhalv10009742m.g.v1.0, Thhalv10015156m.g.v1.0, Thhalv10029203m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp1g28080.v2.2, Sp6g06920.v2.2, Sp6g06940.v2.2 ... Sp6g16220.v2.2
Brassicaceae	Brassica nigra	5	BniB04g049620.2N, BniB04g049630.2N, BniB07g017180.2N ... BniB08g016150.2N, BniB08g035940.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq03G0665
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno10g04750
Plantaginaceae	Plantago ovata	5	Pov_00003078, Pov_00011002, Pov_00011087, Pov_00011217 ... Pov_00041211
Poaceae	Echinochloa crus-galli	8	AH06.127, AH06.128, AH09.119, BH06.215, BH09.195, CH06.201 ... CH06.202, CH09.173
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_6AG0507510, gene-QOZ80_6AG0507520 ... gene-QOZ80_6BG0459600, gene-QOZ80_6BG0459610
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.2HG0096580.1 ... HORVU.MOREX.r3.7HG0645780.1.CDS1
Poaceae	Oryza coarctata	2	Oco07G000720, Oco08G000610
Poaceae	Oryza sativa	3	LOC_Os04g02880.1, LOC_Os06g04230.1, LOC_Os06g04240.1
Poaceae	Paspalum vaginatum	3	gene-BS78_06G015000, gene-BS78_10G025100 ... gene-BS78_10G025200
Poaceae	Sporobolus alterniflorus	4	Chr11G023700, Chr14G001220, Chr21G000310, Chr25G016220
Poaceae	Thinopyrum elongatum	6	Tel2E01G033700, Tel3E01G137600, Tel7E01G155800 ... Tel7E01G156200, Tel7E01G156500, Telscf19601G000100
Poaceae	Triticum dicoccoides	4	gene_TRIDC2AG000970, gene_TRIDC2BG000850 ... gene_TRIDC4AG061910, gene_TRIDC7AG008080
Poaceae	Triticum aestivum	28	TraesCS1A02G381400.1.cds1, TraesCS1B02G403900.1.cds1 ... TraesCS1D02G389100.1.cds1, TraesCS1D02G389200.1.cds1, TraesCS2A02G010000.1, TraesCS2B02G012400.1, TraesCS2D02G010600.1, TraesCS3A02G075900.1.cds1, TraesCS3B02G090000.1.cds1, TraesCS3B02G114300.1.cds1, TraesCS3B02G114500.1.cds1, TraesCS3D02G076000.1.cds1, TraesCS4A02G370400.1.cds1, TraesCS4A02G370700.1, TraesCS4A02G371000.1, TraesCS7A02G070400.1.cds1, TraesCS7A02G070500.1.cds1, TraesCS7A02G072400.1, TraesCS7A02G072700.1.cds1, TraesCS7A02G072900.1.cds1, TraesCS7D02G065600.1.cds1, TraesCS7D02G065700.1.cds1, TraesCS7D02G067400.1.cds1, TraesCS7D02G067500.1.cds1, TraesCS7D02G067600.1.cds1, TraesCS7D02G067700.1.cds1, TraesCS7D02G067800.1.cds1, TraesCS7D02G067900.1.cds1
Poaceae	Zea mays	1	Zm00001eb378110_P001
Poaceae	Zoysia japonica	3	nbis-gene-40329, nbis-gene-40330, nbis-gene-53834
Poaceae	Zoysia macrostachya	3	Zma_g29050, Zma_g29051, Zma_g31295
Portulacaceae	Portulaca oleracea	3	evm.TU.LG02.1376, evm.TU.LG09.593, evm.TU.LG09.594
Posidoniaceae	Posidonia oceanica	3	gene.Posoc04g21440, gene.Posoc06g08740, gene.Posoc06g09270
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-4205
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-8698
Rhizophoraceae	Kandelia candel	1	add.evm.TU.utg000007l.190
Rhizophoraceae	Kandelia obovata	1	Maker00018680
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-10526
Salicaceae	Populus euphratica	4	populus_peu00217, populus_peu00218, populus_peu17234 ... populus_peu27948
Solanaceae	Lycium barbarum	4	gene-LOC132632162, gene-LOC132632163, gene-LOC132634086 ... gene-LOC132634087
Solanaceae	Solanum chilense	3	SOLCI000935600, SOLCI003489800, SOLCI005220900
Solanaceae	Solanum pennellii	3	gene-LOC107013841, gene-LOC107013844, gene-LOC107014669
Tamaricaceae	Reaumuria soongarica	1	STRG.13453_chr07_-
Tamaricaceae	Tamarix chinensis	1	TC08G1253
Zosteraceae	Zostera marina	1	Zosma05g31370.v3.1