Basic Information
Locus ID:
Chr11G023650
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
ribosomal protein S20
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 51963660 | 51965582 | + | Chr11G023650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00338 | Ribosomal protein S10p/S20e | 48 | 132 | 3.3E-20 | IPR027486 |
| SUPERFAMILY | SSF54999 | Ribosomal protein S10 | 49 | 133 | 1.19E-21 | IPR036838 |
| Gene3D | G3DSA:3.30.70.600 | Ribosomal protein S10 domain | 43 | 135 | 2.0E-33 | IPR036838 |
| SMART | SM01403 | Ribosomal_S10_2 | 39 | 132 | 5.9E-21 | IPR027486 |
| TIGRFAM | TIGR01046 | uS10_euk_arch: ribosomal protein uS10 | 49 | 133 | 4.5E-30 | IPR005729 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 71 | 86 | 3.9E-6 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 93 | 107 | 3.9E-6 | IPR001848 |
| Hamap | MF_00508 | 30S ribosomal protein S10 [rpsJ]. | 34 | 133 | 13.324279 | IPR001848 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47370.1 | Ribosomal protein S10p/S20e family protein. | 0 |
| RefSeq | XP_044354449.1 | 40S ribosomal protein S20-like, partial [Triticum aestivum] | 0 |
| P35686 | Small ribosomal subunit protein uS10 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9TN16 | Ribosomal_S10 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_46447 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology