Basic Information
Locus ID:
Chr11G023640
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 51960087 | 51963526 | - | Chr11G023640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 416 | 676 | 1.1E-37 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 69 | 3.8E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 145 | 204 | 2.7E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 237 | 1.81E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 676 | 3.75E-52 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 177 | 1.8E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 178 | 247 | 6.5E-17 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 492 | 678 | 8.4E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 388 | 489 | 4.6E-24 | - |
| SMART | SM00369 | LRR_typ_2 | 143 | 167 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 215 | 9.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 119 | 70.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 411 | 678 | 28.287094 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_004964453.1 | probable leucine-rich repeat receptor-like protein kinase At5g63930 [Setaria italica] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TN90 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_46437 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology