Basic Information
Locus ID:
Chr11G017790
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 44117924 | 44119996 | - | Chr11G017790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 37 | 261 | 7.72517E-71 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 359 | 634 | 1.11325E-95 | - |
| Pfam | PF00069 | Protein kinase domain | 353 | 628 | 2.7E-44 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 47 | 265 | 1.1E-50 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 334 | 653 | 2.43E-73 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 36 | 261 | 1.4E-53 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 317 | 429 | 6.7E-28 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 35 | 279 | 5.8E-59 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 430 | 653 | 9.7E-58 | - |
| SMART | SM00220 | serkin_6 | 353 | 625 | 7.5E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 648 | 35.961857 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 477 | 489 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 146 | 152 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 359 | 383 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_004965240.1 | probable L-type lectin-domain containing receptor kinase S.7 [Setaria italica] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | K3XVL1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101776476 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology