Basic Information
Locus ID:
Chr11G013200
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 16591523 | 16595315 | + | Chr11G013200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07690 | Major Facilitator Superfamily | 345 | 488 | 1.1E-11 | IPR011701 |
| Pfam | PF00083 | Sugar (and other) transporter | 58 | 233 | 7.2E-26 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 7 | 486 | 1.22E-58 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 13 | 490 | 9.8E-76 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 26 | 481 | 33.517582 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 357 | 372 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_025802796.1 | organic cation/carnitine transporter 7-like [Panicum hallii] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SHS2 | MFS domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_55864 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology