Basic Information
Locus ID:
Chr11G011290
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 11682581 | 11684581 | - | Chr11G011290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 17 | 55 | 1.0E-7 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 203 | 317 | 1.9E-5 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 18 | 76 | 1.3E-12 | IPR036047 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 110 | 336 | 7.19E-7 | IPR011043 |
| Gene3D | G3DSA:1.20.1280.50 | - | 9 | 63 | 8.5E-8 | - |
| SMART | SM00256 | fbox_2 | 16 | 56 | 5.5E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 105 | 299 | 1.3E-20 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17270.1 | F-box family protein. | 0 |
| RefSeq | XP_021310079.1 | putative F-box protein At2g02030 [Sorghum bicolor] | 0 |
| Q9LUU4 | Putative F-box protein At3g17270 OS=Arabidopsis thaliana OX=3702 GN=At3g17270 PE=4 SV=1 | 0 | |
| TrEMBL | A0A5J9TFE9 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_42821 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology