Basic Information
Locus ID:
Chr11G010320
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 10602095 | 10605397 | + | Chr11G010320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14270 | UBA | 148 | 173 | 3.84557E-4 | - |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 437 | 553 | 1.8E-9 | IPR001525 |
| SUPERFAMILY | SSF46934 | UBA-like | 122 | 175 | 9.93E-6 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 243 | 435 | 1.8E-24 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 437 | 555 | 2.77E-16 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 433 | 561 | 2.1E-27 | - |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 437 | 564 | 21.466768 | IPR001525 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 233 | 561 | 126.007408 | IPR030380 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 57 | 98 | 9.317883 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_004986027.1 | DNA (cytosine-5)-methyltransferase DRM2 [Setaria italica] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TEY5 | DNA (Cytosine-5)-methyltransferase DRM2 OS=Eragrostis curvula OX=38414 GN=EJB05_42639 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology