Basic Information
Locus ID:
Chr11G010280
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 10578052 | 10580985 | - | Chr11G010280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 61 | 1.6E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 636 | 840 | 1.0E-44 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 188 | 210 | 1.6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 370 | 1.56E-57 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 284 | 565 | 2.0E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 627 | 903 | 3.51E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 714 | 916 | 2.6E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 618 | 713 | 1.3E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 281 | 564 | 3.2E-73 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 171 | 3.9E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 172 | 279 | 1.3E-31 | IPR032675 |
| SMART | SM00220 | serkin_6 | 635 | 920 | 3.5E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 186 | 209 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 162 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 235 | 258 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 474 | 498 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 210 | 234 | 61.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 635 | 906 | 35.848785 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 758 | 770 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 641 | 665 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 189 | 202 | 3.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 474 | 487 | 3.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_025801514.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TDY1 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42635 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology