Basic Information
Locus ID:
Chr11G009230
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
BTB And C-terminal Kelch
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 8949839 | 8954161 | + | Chr11G009230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 130 | 204 | 1.48329E-13 | - |
| Pfam | PF00651 | BTB/POZ domain | 126 | 218 | 3.4E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 240 | 337 | 2.5E-7 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 130 | 218 | 3.69E-13 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 417 | 530 | 1.31E-5 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 110 | 254 | 3.3E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 255 | 359 | 1.6E-11 | - |
| SMART | SM00875 | BACK_2 | 234 | 338 | 0.0051 | IPR011705 |
| SMART | SM00225 | BTB_4 | 123 | 221 | 1.2E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 115 | 190 | 13.384299 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_002438463.1 | BTB/POZ domain-containing protein POB1 [Sorghum bicolor] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9SHL8 | BTB domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_42406 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology