Basic Information
Locus ID:
Chr11G009210
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
mitogen-activated protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 8917257 | 8918507 | + | Chr11G009210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 84 | 378 | 2.4E-58 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 81 | 390 | 3.51E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 413 | 1.3E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 77 | 182 | 2.0E-12 | - |
| SMART | SM00220 | serkin_6 | 84 | 378 | 1.4E-80 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 378 | 43.18433 | IPR000719 |
| ProSiteProfiles | PS50835 | Ig-like domain profile. | 327 | 416 | 6.687205 | IPR007110 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 90 | 114 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 213 | 225 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G33770.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_047079313.1 | putative cyclin-dependent kinase F-2 [Lolium rigidum] | 0 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 0 | |
| TrEMBL | I1GT41 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100821354 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0530300, gene-QOZ80_6BG0484170 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr11G009210 |