Basic Information
Locus ID:
Chr11G004960
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
EBF1
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 4181125 | 4183129 | - | Chr11G004960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 203 | 226 | 0.0024 | IPR001611 |
| Pfam | PF00646 | F-box domain | 51 | 92 | 2.5E-4 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 172 | 628 | 1.73E-40 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 45 | 87 | 6.7E-5 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 243 | 434 | 3.4E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 435 | 631 | 6.8E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 137 | 242 | 4.0E-22 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 387 | 412 | 180.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 361 | 386 | 0.011 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 335 | 360 | 180.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 521 | 546 | 0.011 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 255 | 280 | 0.13 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 547 | 571 | 10.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 573 | 598 | 370.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 467 | 492 | 0.021 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 177 | 202 | 0.27 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 494 | 519 | 11.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 229 | 254 | 0.097 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 203 | 228 | 3.7E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 441 | 466 | 3.7 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_002437255.2 | EIN3-binding F-box protein 1 [Sorghum bicolor] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T9M0 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_41481 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology