Basic Information
Locus ID:
Chr11G002710
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 2115955 | 2133371 | + | Chr11G002710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 178 | 294 | 1.14914E-43 | - |
| CDD | cd00121 | MATH | 18 | 142 | 2.51039E-7 | IPR002083 |
| CDD | cd00121 | MATH | 374 | 443 | 9.83992E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 470 | 578 | 2.9E-23 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 183 | 295 | 1.9E-25 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 403 | 449 | 3.43E-7 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 15 | 144 | 2.62E-11 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 174 | 295 | 1.63E-29 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 460 | 581 | 3.73E-28 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 145 | 4.2E-9 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 297 | 370 | 2.5E-17 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 371 | 449 | 1.1E-5 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 168 | 294 | 9.3E-35 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 455 | 576 | 8.5E-34 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 582 | 645 | 1.5E-19 | - |
| SMART | SM00225 | BTB_4 | 479 | 582 | 1.0E-21 | IPR000210 |
| SMART | SM00225 | BTB_4 | 192 | 297 | 2.2E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 192 | 260 | 17.272514 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 479 | 541 | 16.445236 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_002438817.2 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LEH0 | BTB domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology