Basic Information
Locus ID:
Chr11G001310
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 789867 | 790949 | + | Chr11G001310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 107 | 150 | 6.60199E-18 | - |
| Pfam | PF13639 | Ring finger domain | 107 | 150 | 7.9E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 100 | 155 | 2.78E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 72 | 156 | 8.0E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 108 | 149 | 1.5E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 108 | 150 | 12.164712 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 360 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G05810.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_004966142.1 | RING-H2 finger protein ATL43 [Setaria italica] | 0 |
| Q5EAE9 | RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9T8V7 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_41132 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology