Basic Information
Locus ID:
Chr11G000270
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000011 | 129558 | 133257 | + | Chr11G000270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 365 | 385 | 1.6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 172 | 228 | 2.0E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 532 | 591 | 1.6E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 120 | 133 | 0.89 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 696 | 970 | 1.6E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 5.6E-8 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 74 | 401 | 1.57E-61 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 332 | 619 | 4.42E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 689 | 970 | 6.39E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 661 | 770 | 9.4E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 138 | 2.1E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 231 | 1.1E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 771 | 982 | 3.2E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 336 | 628 | 6.0E-86 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 232 | 335 | 3.1E-31 | IPR032675 |
| SMART | SM00220 | serkin_6 | 694 | 947 | 4.0E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 482 | 505 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 315 | 339 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 291 | 314 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 506 | 530 | 31.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 694 | 971 | 36.074928 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 815 | 827 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_002439033.2 | leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 [Sorghum bicolor] | 0 |
| Q5Z9N5 | Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica OX=39947 GN=FON1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A194YLS1 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3010G267700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology