Basic Information
Locus ID:
Chr10G022240
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000010 | 55135249 | 55138899 | - | Chr10G022240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 491 | 546 | 2.6E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 199 | 255 | 2.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 51 | 92 | 5.8E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 147 | 162 | 0.66 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 320 | 342 | 0.88 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 559 | 618 | 1.2E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 722 | 995 | 3.3E-41 | IPR001245 |
| SUPERFAMILY | SSF52047 | RNI-like | 101 | 428 | 7.85E-63 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 359 | 647 | 2.65E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 718 | 995 | 5.93E-71 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 362 | 657 | 2.0E-84 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 52 | 166 | 2.2E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 167 | 260 | 2.1E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 798 | 1000 | 1.9E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 261 | 361 | 1.1E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 698 | 797 | 1.0E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 270 | 294 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 221 | 245 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 581 | 605 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 533 | 557 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 144 | 170 | 210.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 721 | 972 | 3.2E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 318 | 341 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 509 | 532 | 110.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 721 | 1001 | 36.527214 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 842 | 854 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_002439033.2 | leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 [Sorghum bicolor] | 0 |
| Q5Z9N5 | Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica OX=39947 GN=FON1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J6BR97 | Protein kinase domain-containing protein OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0012g19622 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology