Basic Information
Locus ID:
Chr10G022220
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000010 | 55110053 | 55114968 | - | Chr10G022220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 87 | 277 | 4.29552E-101 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 101 | 256 | 7.9E-13 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 259 | 792 | 3.2E-217 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 641 | 763 | 2.22E-32 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 342 | 621 | 1.67E-90 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 78 | 287 | 2.62E-72 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 341 | 533 | 3.9E-73 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 534 | 620 | 1.9E-37 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 66 | 301 | 4.8E-94 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 621 | 767 | 5.6E-54 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 100 | 257 | 1.4E-8 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 47 | 799 | 2.4E-259 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 98 | 107 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 245 | 262 | 4.7E-72 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 193 | 215 | 4.7E-72 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 263 | 281 | 4.7E-72 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 150 | 167 | 4.7E-72 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 168 | 185 | 4.7E-72 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 99 | 121 | 4.7E-72 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 78 | 98 | 4.7E-72 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 75 | 764 | 26.448887 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 773 | 788 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 767 | 799 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24190.1 | Chaperone protein htpG family protein. encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. | 0 |
| RefSeq | XP_025812385.1 | endoplasmin homolog [Panicum hallii] | 0 |
| P36183 | Endoplasmin homolog OS=Hordeum vulgare OX=4513 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7DU23 | HATPase_c domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_4G012300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology