Basic Information
Locus ID:
Chr10G019930
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000010 | 53374892 | 53376421 | - | Chr10G019930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 17 | 147 | 2.8398E-11 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 172 | 281 | 5.63384E-46 | - |
| Pfam | PF00651 | BTB/POZ domain | 174 | 281 | 7.3E-25 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 16 | 153 | 3.76E-17 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 165 | 283 | 3.14E-30 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 159 | 279 | 4.1E-36 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 15 | 150 | 3.4E-15 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 285 | 348 | 2.1E-19 | - |
| SMART | SM00225 | BTB_4 | 183 | 285 | 6.2E-23 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 14 | 146 | 10.444407 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 183 | 244 | 16.59001 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039807890.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A194YLV0 | BTB domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3010G222100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology