HalophFGD

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Basic Information
Locus ID: Chr10G018310
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description: F-box associated domain
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000010 51678996 51680494 + Chr10G018310
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 22 53 2.6E-7 IPR001810
Pfam PF08268 F-box associated domain 232 316 1.8E-6 IPR013187
SUPERFAMILY SSF81383 F-box domain 20 79 8.63E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 17 59 1.7E-6 -
SMART SM00256 fbox_2 22 62 0.0023 IPR001810
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 230 349 3.4E-11 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G43260.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_025811388.1 F-box protein At5g49610-like [Panicum hallii] 0
Swiss-Prot Q8S8Q9 F-box/LRR-repeat protein At2g43260 OS=Arabidopsis thaliana OX=3702 GN=At2g43260 PE=2 SV=1 0
TrEMBL A0A0A9VSB8 F-box domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Apiaceae Apium graveolens 1 AgUnG00432
Arecaceae Cocos nucifera 1 COCNU_07G015430
Asparagaceae Asparagus officinalis 1 AsparagusV1_10.95.V1.1
Poaceae Echinochloa crus-galli 56 AH01.3037, AH01.3921, AH01.3922, AH01.3924, AH03.3993 ...
AH03.3994, AH05.1009, AH05.1333, AH05.1336, AH05.1338, AH05.3392, AH06.2696, AH08.659, BH01.3380, BH01.4258, BH01.4264, BH01.4265, BH01.4267, BH01.4268, BH01.4269, BH03.4319, BH03.4320, BH03.4322, BH03.4323, BH05.1056, BH05.1058, BH05.1182, BH05.1392, BH05.1393, BH05.1506, BH05.1508, BH06.1844, BH06.2146, BH07.1269, BH07.1271, BH07.1272, BH09.364, BH09.370, CH01.2639, CH01.3621, CH01.4550, CH01.4556, CH01.4558, CH03.4556, CH05.1209, CH05.1527, CH05.1559, CH05.1560, CH05.1562, CH05.1709, CH05.1728, CH06.2372, CH07.190, CH07.192, CH07.193, CH08.118
Poaceae Eleusine coracana subsp. coracana 40 gene-QOZ80_2AG0108950, gene-QOZ80_2AG0109040 ...
gene-QOZ80_2AG0109050, gene-QOZ80_2AG0109070, gene-QOZ80_2AG0133370, gene-QOZ80_2AG0137250, gene-QOZ80_2BG0162470, gene-QOZ80_2BG0162550, gene-QOZ80_2BG0162560, gene-QOZ80_2BG0187190, gene-QOZ80_2BG0188910, gene-QOZ80_2BG0192850, gene-QOZ80_3AG0245010, gene-QOZ80_3AG0245020, gene-QOZ80_3AG0245050, gene-QOZ80_3AG0245060, gene-QOZ80_3BG0283030, gene-QOZ80_3BG0283040, gene-QOZ80_3BG0283080, gene-QOZ80_3BG0294580, gene-QOZ80_4AG0316850, gene-QOZ80_4AG0325830, gene-QOZ80_4BG0353850, gene-QOZ80_5AG0361210, gene-QOZ80_5BG0409810, gene-QOZ80_6AG0533080, gene-QOZ80_6AG0533130, gene-QOZ80_6AG0545430, gene-QOZ80_6BG0498920, gene-QOZ80_7AG0572490, gene-QOZ80_7AG0580690, gene-QOZ80_7AG0580700, gene-QOZ80_7BG0610270, gene-QOZ80_7BG0611860, gene-QOZ80_8AG0620430, gene-QOZ80_8AG0639010, gene-QOZ80_8BG0648180, gene-QOZ80_8BG0666830, gene-QOZ80_9BG0709340, gene-QOZ80_9BG0713800
Poaceae Hordeum vulgare 34 HORVU.MOREX.r3.1HG0008400.1.CDS1 ...
HORVU.MOREX.r3.2HG0210810.1.CDS1, HORVU.MOREX.r3.2HG0210820.1.CDS1, HORVU.MOREX.r3.2HG0210830.1.CDS1, HORVU.MOREX.r3.3HG0220950.1, HORVU.MOREX.r3.3HG0220980.1, HORVU.MOREX.r3.3HG0280880.1.CDS1, HORVU.MOREX.r3.3HG0301580.1.CDS1, HORVU.MOREX.r3.3HG0307870.1.CDS1, HORVU.MOREX.r3.3HG0315070.1.CDS1, HORVU.MOREX.r3.3HG0315150.1.CDS1, HORVU.MOREX.r3.3HG0315210.1.CDS1, HORVU.MOREX.r3.3HG0315220.1.CDS1, HORVU.MOREX.r3.3HG0315250.1.CDS1, HORVU.MOREX.r3.3HG0315420.1.CDS1, HORVU.MOREX.r3.3HG0315620.1.CDS1, HORVU.MOREX.r3.3HG0315900.1.CDS1, HORVU.MOREX.r3.3HG0317650.1.CDS1, HORVU.MOREX.r3.4HG0383460.1.CDS1, HORVU.MOREX.r3.4HG0393840.1.CDS1, HORVU.MOREX.r3.4HG0393850.1.CDS1, HORVU.MOREX.r3.4HG0402080.1.CDS1, HORVU.MOREX.r3.5HG0494930.1.CDS1, HORVU.MOREX.r3.6HG0539480.1.CDS1, HORVU.MOREX.r3.7HG0647760.1.CDS1, HORVU.MOREX.r3.7HG0706930.1.CDS1, HORVU.MOREX.r3.7HG0723480.1.CDS1, HORVU.MOREX.r3.7HG0737000.1.CDS1, HORVU.MOREX.r3.7HG0738720.1.CDS1, HORVU.MOREX.r3.7HG0742490.1.CDS1, HORVU.MOREX.r3.7HG0742550.1.CDS1, HORVU.MOREX.r3.7HG0742610.1.CDS1, HORVU.MOREX.r3.7HG0742810.1.CDS1, HORVU.MOREX.r3.7HG0751140.1.CDS1
Poaceae Lolium multiflorum 112 gene-QYE76_001033, gene-QYE76_006464, gene-QYE76_006626 ...
gene-QYE76_006921, gene-QYE76_007734, gene-QYE76_007735, gene-QYE76_009463, gene-QYE76_012704, gene-QYE76_012706, gene-QYE76_013575, gene-QYE76_013580, gene-QYE76_016722, gene-QYE76_018114, gene-QYE76_019989, gene-QYE76_019990, gene-QYE76_019991, gene-QYE76_019992, gene-QYE76_025774, gene-QYE76_025775, gene-QYE76_025790, gene-QYE76_025791, gene-QYE76_025792, gene-QYE76_025793, gene-QYE76_026009, gene-QYE76_026010, gene-QYE76_026011, gene-QYE76_026012, gene-QYE76_026013, gene-QYE76_026014, gene-QYE76_027348, gene-QYE76_033519, gene-QYE76_033557, gene-QYE76_035388, gene-QYE76_035427, gene-QYE76_035606, gene-QYE76_038125, gene-QYE76_038130, gene-QYE76_038141, gene-QYE76_038174, gene-QYE76_038206, gene-QYE76_038211, gene-QYE76_038212, gene-QYE76_038213, gene-QYE76_038899, gene-QYE76_038900, gene-QYE76_038901, gene-QYE76_038902, gene-QYE76_038903, gene-QYE76_038904, gene-QYE76_038905, gene-QYE76_038906, gene-QYE76_038907, gene-QYE76_038909, gene-QYE76_038911, gene-QYE76_038912, gene-QYE76_038913, gene-QYE76_038915, gene-QYE76_038942, gene-QYE76_038943, gene-QYE76_038952, gene-QYE76_046450, gene-QYE76_046557, gene-QYE76_049307, gene-QYE76_049581, gene-QYE76_049586, gene-QYE76_050379, gene-QYE76_050909, gene-QYE76_050911, gene-QYE76_050913, gene-QYE76_050923, gene-QYE76_050926, gene-QYE76_050929, gene-QYE76_050932, gene-QYE76_057528, gene-QYE76_057764, gene-QYE76_057767, gene-QYE76_057768, gene-QYE76_057771, gene-QYE76_057772, gene-QYE76_057773, gene-QYE76_057779, gene-QYE76_057785, gene-QYE76_058783, gene-QYE76_058874, gene-QYE76_058876, gene-QYE76_058879, gene-QYE76_058880, gene-QYE76_058881, gene-QYE76_058883, gene-QYE76_058884, gene-QYE76_058885, gene-QYE76_058894, gene-QYE76_058895, gene-QYE76_060827, gene-QYE76_065631, gene-QYE76_067867, gene-QYE76_068509, gene-QYE76_068514, gene-QYE76_068517, gene-QYE76_068529, gene-QYE76_068530, gene-QYE76_069804, gene-QYE76_069808, gene-QYE76_069809, gene-QYE76_069855, gene-QYE76_070009, gene-QYE76_070011, gene-QYE76_070013, gene-QYE76_070014, gene-QYE76_070015, gene-QYE76_070017, gene-QYE76_070642
Poaceae Oryza coarctata 20 Oco03G001720, Oco03G012060, Oco04G001590, Oco04G001650 ...
Oco04G012510, Oco05G013500, Oco06G012900, Oco07G001390, Oco07G001400, Oco08G001720, Oco08G001780, Oco09G017200, Oco10G017090, Oco13G003590, Oco13G015200, Oco14G016040, Oco15G008270, Oco20G003430, Oco22G000940, Oco24G000280
Poaceae Oryza sativa 18 LOC_Os02g03810.1, LOC_Os02g03910.1, LOC_Os02g03980.1 ...
LOC_Os02g04000.1, LOC_Os03g22750.1, LOC_Os04g11440.1, LOC_Os04g11450.1, LOC_Os04g11660.1, LOC_Os04g11790.1, LOC_Os04g11890.1, LOC_Os05g51100.1, LOC_Os07g47160.1, LOC_Os07g47170.1, LOC_Os10g03600.1, LOC_Os10g25210.1, LOC_Os11g03680.1, LOC_Os11g05680.1, LOC_Os12g03440.1
Poaceae Paspalum vaginatum 20 gene-BS78_01G050300, gene-BS78_01G372800, gene-BS78_K202900 ...
gene-BS78_02G063100, gene-BS78_02G342200, gene-BS78_02G382600, gene-BS78_04G117200, gene-BS78_04G117300, gene-BS78_06G029900, gene-BS78_06G030200, gene-BS78_06G032800, gene-BS78_06G060000, gene-BS78_06G281500, gene-BS78_08G141400, gene-BS78_08G141500, gene-BS78_09G241400, gene-BS78_09G256300, gene-BS78_10G001400, gene-BS78_10G059100, gene-BS78_10G197200
Poaceae Puccinellia tenuiflora 34 Pt_Chr0102584, Pt_Chr0103011, Pt_Chr0108085, Pt_Chr0204292 ...
Pt_Chr0206181, Pt_Chr0206281, Pt_Chr0206288, Pt_Chr0206595, Pt_Chr0206596, Pt_Chr0305472, Pt_Chr0305862, Pt_Chr0305863, Pt_Chr0305864, Pt_Chr0401485, Pt_Chr0401496, Pt_Chr0401497, Pt_Chr0401500, Pt_Chr0500125, Pt_Chr0500128, Pt_Chr0504581, Pt_Chr0506165, Pt_Chr0600736, Pt_Chr0600739, Pt_Chr0600746, Pt_Chr0600867, Pt_Chr0601035, Pt_Chr0601040, Pt_Chr0603524, Pt_Chr0605859, Pt_Chr0700131, Pt_Chr0700133, Pt_Chr0701243, Pt_Chr0701245, Pt_Ctg00019
Poaceae Sporobolus alterniflorus 28 Chr01G003480, Chr01G009240, Chr01G032510, Chr06G010500 ...
Chr07G002460, Chr09G014730, Chr10G018310, Chr11G004260, Chr11G010710, Chr12G007030, Chr12G007050, Chr12G035350, Chr12G035630, Chr13G010750, Chr15G012010, Chr16G005900, Chr17G005260, Chr17G008500, Chr18G000150, Chr19G000650, Chr22G014200, Chr23G017520, Chr24G012990, Chr24G013000, Chr25G014970, Chr26G002260, Chr27G016840, Chr27G016850
Poaceae Thinopyrum elongatum 42 Tel1E01G097100, Tel1E01G520300, Tel2E01G1022000 ...
Tel2E01G174700, Tel2E01G175200, Tel2E01G202200, Tel2E01G250700, Tel3E01G005200, Tel3E01G005300, Tel3E01G033200, Tel3E01G284100, Tel3E01G560000, Tel3E01G654900, Tel3E01G740000, Tel3E01G740600, Tel3E01G743700, Tel3E01G744200, Tel3E01G744300, Tel3E01G747400, Tel3E01G748200, Tel3E01G749700, Tel3E01G750600, Tel3E01G752700, Tel3E01G752800, Tel4E01G401200, Tel4E01G465200, Tel5E01G474400, Tel5E01G749500, Tel6E01G444800, Tel7E01G162500, Tel7E01G168700, Tel7E01G171100, Tel7E01G171200, Tel7E01G557300, Tel7E01G557400, Tel7E01G741800, Tel7E01G799100, Tel7E01G821900, Tel7E01G865700, Tel7E01G865900, Tel7E01G866400, Tel7E01G866500
Poaceae Triticum dicoccoides 11 gene_TRIDC1AG047770, gene_TRIDC1BG054040 ...
gene_TRIDC2AG010770, gene_TRIDC3AG058460, gene_TRIDC4AG060830, gene_TRIDC4AG060860, gene_TRIDC4AG060880, gene_TRIDC7AG045560, gene_TRIDC7AG045570, gene_TRIDC7AG045580, gene_TRIDC7BG037500
Poaceae Triticum aestivum 183 TraesCS1B02G020100.1.cds1, TraesCS1B02G046800.1.cds1 ...
TraesCS1B02G059300.1.cds1, TraesCS1B02G333500.1.cds1, TraesCS1D02G046600.1.cds1, TraesCS1D02G321000.1.cds1, TraesCS2A02G040400.1.cds1, TraesCS2A02G050200.1, TraesCS2A02G051300.1, TraesCS2A02G093500.1.cds1, TraesCS2A02G093600.1.cds1, TraesCS2B02G064000.1.cds1, TraesCS2B02G064100.1.cds1, TraesCS2B02G107900.1.cds1, TraesCS2B02G108100.1.cds1, TraesCS2B02G139700.1.cds1, TraesCS2D02G050400.1.cds1, TraesCS2D02G050500.1.cds1, TraesCS2D02G078200.1.cds1, TraesCS2D02G120600.1.cds1, TraesCS2D02G120700.1.cds1, TraesCS3A02G082000.1.cds1, TraesCS3A02G103200.1.cds1, TraesCS3A02G158900.1, TraesCS3A02G161500.1, TraesCS3A02G411300.1.cds1, TraesCS3A02G412300.1.cds1, TraesCS3A02G436300.1, TraesCS3A02G462600.1.cds1, TraesCS3A02G464500.1.cds1, TraesCS3A02G464900.1.cds1, TraesCS3A02G465200.1.cds1, TraesCS3A02G465500.1.cds1, TraesCS3A02G465900.1.cds1, TraesCS3A02G466000.1.cds1, TraesCS3A02G466300.1.cds1, TraesCS3A02G466600.1.cds1, TraesCS3A02G466900.1, TraesCS3A02G467400.1.cds1, TraesCS3A02G468700.1.cds1, TraesCS3A02G468800.1.cds1, TraesCS3A02G470300.1.cds1, TraesCS3A02G470400.1, TraesCS3A02G476800.1.cds1, TraesCS3A02G487100.1.cds1, TraesCS3A02G511900.1.cds1, TraesCS3B02G004400.1.cds1, TraesCS3B02G005700.1.cds1, TraesCS3B02G026500.1.cds1, TraesCS3B02G026600.1.cds1, TraesCS3B02G189900.1, TraesCS3B02G192800.1.cds1, TraesCS3B02G381900.1.cds1, TraesCS3B02G444400.1.cds1, TraesCS3B02G445900.1.cds1, TraesCS3B02G446000.1.cds1, TraesCS3B02G505700.1.cds1, TraesCS3B02G505800.1, TraesCS3B02G507900.1.cds1, TraesCS3B02G508000.1.cds1, TraesCS3B02G508200.1.cds1, TraesCS3B02G508300.1.cds1, TraesCS3B02G508900.1.cds1, TraesCS3B02G509200.1, TraesCS3B02G509500.1.cds1, TraesCS3B02G509800.1.cds1, TraesCS3B02G509900.1.cds1, TraesCS3B02G510000.1.cds1, TraesCS3B02G513000.1.cds1, TraesCS3B02G520600.1.cds1, TraesCS3B02G533400.1.cds1, TraesCS3B02G534100.1.cds1, TraesCS3D02G024000.1.cds1, TraesCS3D02G027000.1, TraesCS3D02G027100.1.cds1, TraesCS3D02G027200.1.cds1, TraesCS3D02G105600.1.cds1, TraesCS3D02G406600.1.cds1, TraesCS3D02G456700.1.cds1, TraesCS3D02G459200.1.cds1, TraesCS3D02G460500.1.cds1, TraesCS3D02G460700.1.cds1, TraesCS3D02G460900.1.cds1, TraesCS3D02G461100.1.cds1, TraesCS3D02G461300.1, TraesCS3D02G462400.1.cds1, TraesCS3D02G462500.1.cds1, TraesCS3D02G463100.1.cds1, TraesCS3D02G463400.1.cds1, TraesCS3D02G463500.1.cds1, TraesCS3D02G463900.1.cds1, TraesCS3D02G464000.1.cds1, TraesCS3D02G464500.1.cds1, TraesCS3D02G465200.1.cds1, TraesCS3D02G471300.1.cds1, TraesCS3D02G481100.1.cds1, TraesCS3D02G481500.1.cds1, TraesCS3D02G482400.1.cds1, TraesCS4A02G076500.1.cds1, TraesCS4A02G373400.1.cds1, TraesCS4A02G378500.1.cds1, TraesCS4A02G378700.1.cds1, TraesCS4A02G378900.1.cds1, TraesCS4A02G379000.1.cds1, TraesCS4A02G379200.1.cds1, TraesCS4A02G383600.1.cds1, TraesCS4B02G232400.1.cds1, TraesCS4B02G232500.1.cds1, TraesCS4B02G277300.1.cds1, TraesCS4D02G233700.1.cds1, TraesCS4D02G233800.1.cds1, TraesCS5A02G297600.1.cds1, TraesCS5A02G297800.1, TraesCS5B02G019200.1.cds1, TraesCS5B02G296800.1.cds1, TraesCS5D02G304600.1.cds1, TraesCS5D02G485600.1.cds1, TraesCS6A02G233000.1.cds1, TraesCS6B02G006300.1.cds1, TraesCS6B02G008000.1.cds1, TraesCS6B02G008500.1.cds1, TraesCS6B02G014600.1.cds1, TraesCS6D02G002100.1.cds1, TraesCS7A02G075300.1.cds1, TraesCS7A02G081600.1.cds1, TraesCS7A02G081700.1.cds1, TraesCS7A02G081800.1.cds1, TraesCS7A02G325100.1.cds1, TraesCS7A02G395500.1.cds1, TraesCS7A02G440700.1, TraesCS7A02G440800.1.cds1, TraesCS7A02G441000.1.cds1, TraesCS7A02G505400.1.cds1, TraesCS7A02G505500.1.cds1, TraesCS7A02G505600.1.cds1, TraesCS7A02G505700.1.cds1, TraesCS7A02G507000.1.cds1, TraesCS7B02G225800.1.cds1, TraesCS7B02G225900.1, TraesCS7B02G297400.1.cds1, TraesCS7B02G339400.1, TraesCS7B02G339500.1, TraesCS7B02G339600.1.cds1, TraesCS7B02G387700.1.cds1, TraesCS7B02G412800.1.cds1, TraesCS7B02G412900.1.cds1, TraesCS7B02G413000.1.cds1, TraesCS7B02G415200.1.cds1, TraesCS7D02G070800.1.cds1, TraesCS7D02G075100.1, TraesCS7D02G075300.1.cds1, TraesCS7D02G075400.1.cds1, TraesCS7D02G321700.1.cds1, TraesCS7D02G321800.1.cds1, TraesCS7D02G391000.1.cds1, TraesCS7D02G430200.1.cds1, TraesCS7D02G430500.1.cds1, TraesCS7D02G459100.1, TraesCS7D02G471500.1.cds1, TraesCS7D02G493200.1.cds1, TraesCS7D02G493300.1.cds1, TraesCS7D02G493400.1.cds1, TraesCS7D02G493500.1.cds1, TraesCS7D02G493600.1.cds1, TraesCS7D02G493700.1.cds1, TraesCSU02G009500.1.cds1, TraesCSU02G039500.1.cds1, TraesCSU02G051400.1, TraesCSU02G051500.1.cds1, TraesCSU02G051600.1.cds1, TraesCSU02G061900.1.cds1, TraesCSU02G062300.1.cds1, TraesCSU02G062400.1.cds1, TraesCSU02G163400.1, TraesCSU02G163500.1.cds1, TraesCSU02G172700.1, TraesCSU02G176400.1, TraesCSU02G185300.1.cds1, TraesCSU02G190900.1.cds1, TraesCSU02G195200.1.cds1, TraesCSU02G197300.1.cds1, TraesCSU02G228800.1.cds1, TraesCSU02G229900.1.cds1
Poaceae Zea mays 7 Zm00001eb014060_P001, Zm00001eb014070_P001 ...
Zm00001eb014080_P001, Zm00001eb031570_P001, Zm00001eb091000_P001, Zm00001eb157180_P001, Zm00001eb387810_P001
Poaceae Zoysia japonica 12 nbis-gene-1468, nbis-gene-1469, nbis-gene-1471 ...
nbis-gene-18852, nbis-gene-1893, nbis-gene-1894, nbis-gene-1900, nbis-gene-45755, nbis-gene-45756, nbis-gene-49191, nbis-gene-55221, nbis-gene-9992
Poaceae Zoysia macrostachya 6 Zma_g1141, Zma_g1397, Zma_g1398, Zma_g1399, Zma_g1402 ...
Zma_g18961
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