Basic Information
Locus ID:
Chr10G017660
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
EBF1
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000010 | 50986985 | 50989998 | + | Chr10G017660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 54 | 95 | 2.5E-4 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 205 | 228 | 0.0024 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 198 | 631 | 4.97E-36 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 48 | 90 | 6.7E-5 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 245 | 1.9E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 246 | 436 | 1.9E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 437 | 633 | 1.1E-32 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 363 | 388 | 0.68 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 523 | 548 | 0.0058 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 231 | 256 | 0.097 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 205 | 230 | 3.7E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 337 | 362 | 180.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 575 | 600 | 490.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 389 | 414 | 110.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 257 | 282 | 2.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 549 | 573 | 10.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 150 | 178 | 620.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 469 | 494 | 0.37 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 179 | 204 | 0.059 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 443 | 468 | 7.8 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 496 | 521 | 1.6 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_034590816.1 | EIN3-binding F-box protein 1-like [Setaria viridis] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T9M0 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_41481 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology