Basic Information
Locus ID:
Chr10G016540
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000010 | 49698894 | 49700306 | - | Chr10G016540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 304 | 328 | 6.95904E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 287 | 339 | 1.26E-5 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 268 | 346 | 2.1E-5 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 303 | 348 | 8.854941 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025825460.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum hallii] | 0 |
| TrEMBL | A0A0D3FJ80 | DUF1618 domain-containing protein OS=Oryza barthii OX=65489 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0300840, gene-QOZ80_4BG0331550 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0199930.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_047063, gene-QYE76_055297, gene-QYE76_060667 ... |
| Poaceae | Oryza coarctata | 2 | Oco07G018090, Oco08G017470 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g56460.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G267800 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr10G016540, Chr23G001910, Chr26G017400 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G823800, Tel2E01G845000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG070360, gene_TRIDC2BG076060 |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G500000.1.cds1, TraesCS2B02G513200.1.cds1 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-24472, nbis-gene-6092 |