Basic Information
Locus ID:
Chr10G011990
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000010 | 43120435 | 43130187 | + | Chr10G011990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 641 | 832 | 8.5E-38 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 190 | 212 | 1.6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 63 | 5.2E-8 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 286 | 568 | 1.45E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 633 | 893 | 3.55E-61 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 394 | 3.23E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 719 | 904 | 4.7E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 623 | 718 | 3.1E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 154 | 1.5E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 236 | 568 | 8.8E-88 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 155 | 235 | 5.2E-20 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 139 | 164 | 300.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 640 | 897 | 8.9E-17 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 477 | 501 | 2.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 236 | 260 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 188 | 212 | 8.8 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 479 | 501 | 7.21141 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 640 | 897 | 30.590935 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 646 | 670 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 758 | 770 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 191 | 204 | 2.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 477 | 490 | 2.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_025801514.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TDY1 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42635 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology