Basic Information
Locus ID:
Chr10G007570
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000010 | 33039874 | 33042749 | + | Chr10G007570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00183 | Hsp90 protein | 87 | 233 | 3.6E-53 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 421 | 517 | 3.2E-23 | IPR001404 |
| Pfam | PF13589 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 2 | 83 | 7.1E-7 | - |
| Pfam | PF00183 | Hsp90 protein | 248 | 409 | 2.6E-63 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 423 | 487 | 8.89E-14 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 2 | 114 | 1.83E-34 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 159 | 387 | 1.52E-68 | IPR020568 |
| Gene3D | G3DSA:3.40.50.11260 | - | 304 | 397 | 1.4E-34 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 1 | 129 | 2.5E-43 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 244 | 303 | 6.1E-17 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 398 | 497 | 1.2E-22 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 158 | 242 | 2.0E-30 | - |
| PIRSF | PIRSF002583 | HSP90_HTPG | 411 | 521 | 5.2E-15 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 244 | 422 | 1.7E-46 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 68 | 245 | 2.3E-42 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 1 | 72 | 2.7E-29 | IPR001404 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 1 | 18 | 1.0E-30 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 44 | 66 | 1.0E-30 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 19 | 36 | 1.0E-30 | IPR020575 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 495 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 144 | - | - |
| Coils | Coil | Coil | 126 | 160 | - | - |
| Coils | Coil | Coil | 391 | 411 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56030.1 | heat shock protein 81-2. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. | 0 |
| RefSeq | XP_002460433.1 | heat shock protein 81-2 [Sorghum bicolor] | 0 |
| A2YWQ1 | Heat shock protein 81-1 OS=Oryza sativa subsp. indica OX=39946 GN=HSP81-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811NNS3 | HATPase_c domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS16754 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology