Basic Information
Locus ID:
Chr10G007560
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000010 | 33025678 | 33028798 | - | Chr10G007560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 15 | 164 | 1.37633E-68 | - |
| Pfam | PF00183 | Hsp90 protein | 190 | 639 | 8.6E-173 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 30 | 160 | 2.2E-9 | IPR003594 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 5 | 202 | 1.06E-47 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 253 | 485 | 4.48E-87 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 509 | 610 | 1.44E-27 | IPR037196 |
| Gene3D | G3DSA:1.20.120.790 | - | 485 | 596 | 3.0E-46 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 409 | 484 | 4.1E-28 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 252 | 408 | 9.8E-68 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 3 | 218 | 8.2E-62 | IPR036890 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 1 | 643 | 8.6E-176 | IPR001404 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 6 | 26 | 7.9E-18 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 178 | 196 | 7.9E-18 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 107 | 129 | 7.9E-18 | IPR020575 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 621 | 644 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 232 | - | - |
| Coils | Coil | Coil | 643 | 644 | - | - |
| Coils | Coil | Coil | 489 | 509 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56010.1 | heat shock protein 81-3. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Overexpression reduced tolerance to heat and conferred higher tolerance to calcium. | 0 |
| RefSeq | XP_039820640.1 | heat shock protein 81-1-like [Panicum virgatum] | 0 |
| A2YWQ1 | Heat shock protein 81-1 OS=Oryza sativa subsp. indica OX=39946 GN=HSP81-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0EN37 | HATPase_c domain-containing protein OS=Oryza meridionalis OX=40149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology