Basic Information
Locus ID:
Chr10G006280
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000010 | 29467692 | 29471768 | + | Chr10G006280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 85 | 1.1E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 409 | 674 | 8.7E-36 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 133 | 193 | 2.2E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 676 | 7.34E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 255 | 9.07E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 370 | 484 | 4.8E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 486 | 701 | 1.2E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 273 | 2.7E-48 | IPR032675 |
| SMART | SM00220 | serkin_6 | 409 | 676 | 6.0E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 409 | 676 | 32.866512 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 682 | 703 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 703 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_022679901.1 | protein STRUBBELIG-RECEPTOR FAMILY 5 [Setaria italica] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SHN9 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_55861 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology