Basic Information
Locus ID:
Chr10G005180
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000010 | 24723881 | 24725146 | + | Chr10G005180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 68 | 2.0E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 123 | 168 | 1.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 95 | 387 | 4.22E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 205 | 8.4E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 392 | 5.1E-26 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17640.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_004965417.1 | probable LRR receptor-like serine/threonine-protein kinase At4g20940 [Setaria italica] | 0 |
| F4HTV4 | Receptor-like protein 14 OS=Arabidopsis thaliana OX=3702 GN=RLP14 PE=3 SV=1 | 0 | |
| TrEMBL | K3XX40 | LRRNT_2 domain-containing protein OS=Setaria italica OX=4555 GN=101783631 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology