HalophFGD

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Basic Information
Locus ID: Chr10G003210
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description: Protein of unknown function (DUF 659)
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000010 11988130 11989049 - Chr10G003210
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 86 117 - -
MobiDBLite mobidb-lite consensus disorder prediction 78 117 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_019172849.1 PREDICTED: uncharacterized protein LOC109168288 [Ipomoea nil] 0
TrEMBL A0A3L6EHP7 CHZ domain-containing protein OS=Zea mays OX=4577 GN=Zm00014a_009690 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 1 AH07.1505
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_5AG0386670
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.2HG0133620.1.CDS1 ...
HORVU.MOREX.r3.2HG0199440.1.CDS1, HORVU.MOREX.r3.5HG0482150.1.CDS1, HORVU.MOREX.r3.5HG0530320.1.CDS1
Poaceae Sporobolus alterniflorus 6 Chr03G008640, Chr06G020320, Chr09G011090, Chr09G011260 ...
Chr10G003210, Chr31G008230
Poaceae Triticum aestivum 9 TraesCS1B02G452600.1.cds1, TraesCS3A02G198500.1.cds1 ...
TraesCS3B02G138300.1, TraesCS5B02G518300.1.cds1, TraesCS6A02G166600.1.cds1, TraesCS6A02G305900.1.cds1, TraesCS6D02G181500.1.cds1, TraesCS7A02G408400.1.cds1, TraesCS7B02G340800.1.cds1
Poaceae Zea mays 3 Zm00001eb170800_P001, Zm00001eb221320_P001 ...
Zm00001eb311710_P001
Poaceae Zoysia japonica 3 nbis-gene-24547, nbis-gene-35634, nbis-gene-56951
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.