Basic Information
Locus ID:
Chr0G030480
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein of unknown function (DUF 659)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000087 | 356480 | 359551 | + | Chr0G030480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 221 | 459 | 5.84E-19 | IPR012337 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 530 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 608 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 622 | 644 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 650 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025877600.1 | uncharacterized protein LOC107279693 [Oryza sativa Japonica Group] | 0 |
| TrEMBL | A0A1R3Q1V2 | Uncharacterized protein OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d043856 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | BH01.4753, BH06.686, BH08.2468, BH08.2472, CH05.2087 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1BG0056120, gene-QOZ80_4BG0351070 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_048311, gene-QYE76_055843 |
| Poaceae | Paspalum vaginatum | 15 | gene-BS78_03G023900, gene-BS78_03G199100, gene-BS78_K224500 ... |
| Poaceae | Sporobolus alterniflorus | 11 | Chr03G013220, Chr03G013230, Chr03G013240, Chr05G004880 ... |