Basic Information
Locus ID:
Chr0G023900
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
TAZ zinc finger, present in p300 and CBP
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000043 | 462459 | 465060 | + | Chr0G023900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02135 | TAZ zinc finger | 238 | 324 | 7.3E-14 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 106 | 166 | 2.4E-4 | IPR000210 |
| SUPERFAMILY | SSF57933 | TAZ domain | 232 | 332 | 2.35E-22 | IPR035898 |
| SUPERFAMILY | SSF54695 | POZ domain | 82 | 167 | 1.49E-7 | IPR011333 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 225 | 351 | 1.0E-22 | IPR035898 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 72 | 198 | 4.4E-13 | IPR011333 |
| SMART | SM00551 | TAZ_2 | 231 | 325 | 1.3E-34 | IPR000197 |
| ProSiteProfiles | PS50134 | Zinc finger TAZ-type profile. | 228 | 327 | 9.444854 | IPR000197 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 69 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05690.1 | BTB and TAZ domain protein 3. BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development. | 0 |
| RefSeq | XP_034595245.1 | BTB/POZ and TAZ domain-containing protein 3 [Setaria viridis] | 0 |
| Q9SYL0 | BTB/POZ and TAZ domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BT3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9VKU2 | TAZ-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_18145 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology