halophFGD

Basic Information

Locus ID: Chr0G022710

Species & Taxonomic ID: Sporobolus alterniflorus & 29706

Genome Assembly: GWHCBIM00000000

Description: Anaphase-promoting complex subunit 4 WD40 domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
GWHCBIM00000054	58844	62489	-	Chr0G022710

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
0.00	0.00 Da	0.00	0.00	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00400	WD domain, G-beta repeat	120	149	0.093	IPR001680
SUPERFAMILY	SSF50978	WD40 repeat-like	80	281	3.52E-15	IPR036322
Gene3D	G3DSA:2.130.10.10	-	75	284	1.4E-32	IPR015943

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K03363 (cell division cycle 20, cofactor of APC complex)

Pathway:

ko04110 (Cell cycle) map04110 (Cell cycle) ko04111 (Cell cycle - yeast) map04111 (Cell cycle - yeast) ko04113 (Meiosis - yeast) map04113 (Meiosis - yeast) ko04114 (Oocyte meiosis) map04114 (Oocyte meiosis) ko04120 (Ubiquitin mediated proteolysis) map04120 (Ubiquitin mediated proteolysis)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G33270.1	Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.1)
RefSeq	XP_021314547.1	cell division cycle 20.2, cofactor of APC complex-like [Sorghum bicolor]
Swiss-Prot	Q9SZA4	Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1
TrEMBL	A0A5J9UW77	ANAPC4_WD40 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_19631 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

No orthogroup found for Chr0G022710.