Basic Information
Locus ID:
Chr0G020470
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000432 | 199620 | 201125 | + | Chr0G020470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 122 | 164 | 2.76998E-17 | - |
| Pfam | PF13639 | Ring finger domain | 121 | 164 | 3.7E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 116 | 170 | 5.55E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 96 | 173 | 1.9E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 122 | 163 | 6.9E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 122 | 164 | 12.754832 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 302 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20030.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_025808579.1 | putative RING-H2 finger protein ATL12 [Panicum hallii] | 0 |
| Q9SL78 | Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana OX=3702 GN=ATL12 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9U929 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_36286 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology