Basic Information
Locus ID:
Chr0G018450
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000207 | 265797 | 270933 | + | Chr0G018450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 539 | 796 | 3.82367E-108 | - |
| CDD | cd06410 | PB1_UP2 | 45 | 139 | 1.31405E-37 | - |
| Pfam | PF00564 | PB1 domain | 60 | 139 | 4.9E-13 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 536 | 796 | 1.4E-62 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 57 | 147 | 3.47E-18 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 521 | 795 | 5.26E-76 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 62 | 142 | 2.2E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 526 | 620 | 6.7E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 621 | 808 | 8.2E-54 | - |
| SMART | SM00666 | PB1_new | 56 | 141 | 1.2E-20 | IPR000270 |
| SMART | SM00220 | serkin_6 | 533 | 800 | 1.0E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 533 | 800 | 42.23735 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 658 | 670 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 652 | 670 | 3.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 723 | 745 | 3.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 767 | 789 | 3.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 615 | 628 | 3.5E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 465 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 495 | 509 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 493 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_034581860.1 | dual specificity protein kinase shkD-like [Setaria viridis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VXZ8 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_13677 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology