Basic Information
Locus ID:
Chr0G015360
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000164 | 173376 | 178029 | + | Chr0G015360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 88 | 284 | 3.94897E-97 | - |
| Pfam | PF00183 | Hsp90 protein | 266 | 763 | 1.2E-193 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 102 | 261 | 1.8E-11 | IPR003594 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 617 | 738 | 3.01E-33 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 337 | 595 | 3.57E-89 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 79 | 294 | 1.57E-60 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 335 | 507 | 6.3E-72 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 595 | 742 | 1.9E-53 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 508 | 594 | 6.5E-32 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 65 | 309 | 2.8E-87 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 101 | 263 | 9.1E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 60 | 779 | 5.5E-238 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 99 | 108 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 251 | 268 | 2.1E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 270 | 288 | 2.1E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 167 | 184 | 2.1E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 79 | 99 | 2.1E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 100 | 122 | 2.1E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 196 | 218 | 2.1E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 149 | 166 | 2.1E-61 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 76 | 739 | 26.031223 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 765 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 789 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 319 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_052168431.1 | heat shock protein 90-5, chloroplastic-like [Oryza glaberrima] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TET5 | HATPase_c domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_43422 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology